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NCBI C++ ToolKit: src/util/bitset/stress_test/rlebtv.h Source File

(

pos)

;

* d=0)

;

, dsize;

cout <<

<< endl;

(

= 2;

<

; ++

)

cout <<

<< endl;

GAP vector is designed to be very small.

void combine_sub(const gap_vector &vect)

const gap_word_t * get_buf() const

int is_bit_true(unsigned pos) const

Checks if bit pos 1 or 0. Returns 0 if 0 and non zero otherwise.

bool set_bit(unsigned pos)

Sets bit number pos to 1 returns true if operation sucessful, false if GAP threashold reached and we ...

void combine_xor(const gap_vector &vect)

int compare(const gap_vector &vect)

int combine_and(const gap_word_t *other)

void convert_to_bitset(unsigned *dest) const

bool clear_bit(unsigned pos)

Sets bit number pos to 0.

int test(unsigned pos) const

void combine_or(const gap_vector &vect)

unsigned count_range(unsigned left, unsigned right, unsigned *d=0) const

gap_vector(gap_word_t init=0)

bool get_last(unsigned *last) const

gap_word_t m_buf[bm::gap_max_buff_len+3]

unsigned bit_count() const

Counts number of bits ON.

static void DLIST_NAME() init(DLIST_LIST_TYPE *list)

static DLIST_TYPE *DLIST_NAME() last(DLIST_LIST_TYPE *list)

static DLIST_TYPE *DLIST_NAME() prev(DLIST_LIST_TYPE *list, DLIST_TYPE *item)

unsigned gap_bit_count_range(const T *const buf, unsigned left, unsigned right) noexcept

Counts 1 bits in GAP buffer in the closed [left, right] range.

gap_word_t * gap_operation_xor(const gap_word_t *vect1, const gap_word_t *vect2, gap_word_t *tmp_buf, unsigned &dsize) noexcept

GAP XOR operation.

gap_word_t * gap_operation_or(const gap_word_t *vect1, const gap_word_t *vect2, gap_word_t *tmp_buf, unsigned &dsize) noexcept

GAP OR operation.

unsigned gap_test(const T *buf, unsigned pos) noexcept

Tests if bit = pos is true.

unsigned gap_bit_count(const T *buf, unsigned dsize=0) noexcept

Calculates number of bits ON in GAP buffer.

unsigned gap_control_sum(const T *buf) noexcept

Calculates sum of all words in GAP block. (For debugging purposes)

unsigned gap_test_unr(const T *buf, const unsigned pos) noexcept

Tests if bit = pos is true. Analog of bm::gap_test with SIMD unrolling.

void gap_convert_to_bitset(unsigned *dest, const T *buf, unsigned len=0) noexcept

GAP block to bitblock conversion.

gap_word_t * gap_operation_sub(const gap_word_t *vect1, const gap_word_t *vect2, gap_word_t *tmp_buf, unsigned &dsize) noexcept

GAP SUB (AND NOT) operation.

gap_word_t * gap_operation_and(const gap_word_t *vect1, const gap_word_t *vect2, gap_word_t *tmp_buf, unsigned &dsize) noexcept

GAP AND operation.

unsigned gap_set_value(unsigned val, T *buf, unsigned pos) noexcept

Sets or clears bit in the GAP buffer.

unsigned gap_find_last(const T *buf, unsigned *last) noexcept

GAP block find the last set bit.

int gapcmp(const T *buf1, const T *buf2) noexcept

Lexicographical comparison of GAP buffers.

bm::gap_word_t gap_length(const bm::gap_word_t *buf) noexcept

Returs GAP block length.

unsigned int

A callback function used to compare two keys in a database.

const unsigned gap_max_buff_len

unsigned short gap_word_t

const unsigned gap_max_bits

static const sljit_gpr r1

static const sljit_gpr r2

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