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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/residue_8hpp_source.html below:

NCBI C++ ToolKit: src/app/cn3d/residue.hpp Source File

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34 #ifndef CN3D_RESIDUE__HPP 35 #define CN3D_RESIDUE__HPP 62  const

ncbi::objects::CResidue& residue,

int

moleculeID,

65  int

nResidues,

int

moleculeType);

80

eDNA = ncbi::objects::CResidue_graph::eResidue_type_deoxyribonucleotide,

81  eRNA

= ncbi::objects::CResidue_graph::eResidue_type_ribonucleotide,

82

eAminoAcid = ncbi::objects::CResidue_graph::eResidue_type_amino_acid,

83  eOther

= ncbi::objects::CResidue_graph::eResidue_type_other

110  bool HasName

(

void

)

const

{

return

(!nameGraph.empty()); }

113  bool

Draw(

const AtomSet

*atomSet)

const

;

130

AtomInfoMap::const_iterator

info

=atomInfos.find(aID);

131  if

(

info

!= atomInfos.end())

return

(*info).second;

User-defined methods of the data storage class.

User-defined methods of the data storage class.

static const CBiostruc_residue_graph_set * standardDictionary

bool IsNucleotide(void) const

static const char NO_CODE

int NAtomsWithAnyCoords(void) const

const AtomInfo * GetAtomInfo(int aID) const

static const int NO_ALPHA_ID

std::map< int, const AtomInfo * > AtomInfoMap

bool IsAminoAcid(void) const

const AtomInfoMap & GetAtomInfos(void) const

int NAtomsInGraph(void) const

std::list< const Bond * > BondList

#define ERR_POST(message)

Error posting with file, line number information but without error codes.

void Warning(CExceptionArgs_Base &args)

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_SCOPE(ns)

Define a new scope.

std::list< ncbi::CRef< ncbi::objects::CResidue_graph > > ResidueGraphList

Magic spell ;-) needed for some weird compilers... very empiric.

The NCBI C++/STL use hints.

eAtomClassification classification


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