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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/remove__dup__feats__dlg_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/packages/pkg_sequence_edit/remove_dup_feats_dlg.cpp Source File

53 #include <wx/button.h> 54 #include <wx/statbox.h> 55 #include <wx/msgdlg.h> 77

wxWindowID

id

,

const

wxString& caption,

const

wxPoint& pos,

const

wxSize&

size

,

long

style )

81  Create

(parent,

id

, caption, pos,

size

, style);

87

SetExtraStyle(wxWS_EX_BLOCK_EVENTS);

93

GetSizer()->SetSizeHints(

this

);

126

wxBoxSizer* itemBoxSizer2 =

new

wxBoxSizer(wxVERTICAL);

127

itemDialog1->SetSizer(itemBoxSizer2);

130

itemBoxSizer2->Add(

m_FeatureType

, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 0);

133  m_CheckPartials

=

new

wxCheckBox( itemDialog1,

wxID_ANY

,

_

(

"Check partials"

), wxDefaultPosition, wxDefaultSize, 0 );

135

itemBoxSizer2->Add(

m_CheckPartials

, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 0);

137  m_CaseSensitive

=

new

wxCheckBox( itemDialog1,

wxID_ANY

,

_

(

"Case sensitive"

), wxDefaultPosition, wxDefaultSize, 0 );

139

itemBoxSizer2->Add(

m_CaseSensitive

, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 0);

141  m_RemoveProteins

=

new

wxCheckBox( itemDialog1,

wxID_ANY

,

_

(

"Remove proteins"

), wxDefaultPosition, wxDefaultSize, 0 );

143

itemBoxSizer2->Add(

m_RemoveProteins

, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 0);

153

itemBoxSizer2->Add(OkCancel, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

191  bool

modified =

false

;

196  if

(field_name.empty())

203

vector<CSeq_entry_Handle> entry_handles;

206  if

(constraint && !constraint_field.empty())

212  const CSeq_feat

*feat =

dynamic_cast<const CSeq_feat

*

>

( (*obj_it)->GetOriginalObject() );

231  ITERATE

(vector<CSeq_entry_Handle>, seh_it, entry_handles)

238  if

(feat1->GetSeq_feat_Handle() < feat2->GetSeq_feat_Handle() &&

239

deleted_feats.

find

(feat1->GetSeq_feat_Handle()) == deleted_feats.

end

() &&

240

deleted_feats.

find

(feat2->GetSeq_feat_Handle()) == deleted_feats.

end

() &&

244

deleted_feats.

insert

(feat2->GetSeq_feat_Handle());

263

wxSizerItemList& slist = sizer->GetChildren();

265  for

(wxSizerItemList::iterator iter = slist.begin(); iter != slist.end(); ++iter, ++

n

) {

266  if

((*iter)->IsSizer()) {

268

}

else if

((*iter)->IsWindow()) {

269

wxWindow* child = (*iter)->GetWindow();

275

wxSizer* subsizer = child->GetSizer();

objects::CSeq_entry_Handle m_TopSeqEntry

bool Create(wxWindow *parent, wxWindowID id, const wxString &title, const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxDefaultSize, long style=wxDEFAULT_FRAME_STYLE, const wxString &name=wxFrameNameStr)

void PopulateFeatureListbox(void)

virtual string GetFieldName(const bool subfield=false)

Returns the name of the field as selected in the panel.

virtual string GetFieldName(const bool subfield=false)

Returns the name of the field as selected in the panel.

void ListPresentFeaturesFirst(const objects::CSeq_entry_Handle &entry, vector< const objects::CFeatListItem * > *featlist=nullptr)

vector< CRef< objects::edit::CApplyObject > > GetApplyObjects(objects::CBioseq_Handle bsh)

wxCheckBox * m_CaseSensitive

CStringConstraintPanel * m_StringConstraintPanel

bool Create(wxWindow *parent, wxWindowID id=11000, const wxString &caption=_("Remove Duplicate Features"), const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxDefaultSize, long style=wxCAPTION|wxRESIZE_BORDER|wxSYSTEM_MENU|wxCLOSE_BOX|wxTAB_TRAVERSAL)

Creation.

void Init()

Initialises member variables.

wxCheckBox * m_CheckPartials

CFeatureFieldNamePanel * m_FeatureConstraint

wxIcon GetIconResource(const wxString &name)

Retrieves icon resources.

static bool ShowToolTips()

Should we show tooltips?

virtual CRef< CCmdComposite > GetCommand()

void CreateControls()

Creates the controls and sizers.

CFeatureTypePanel * m_FeatureType

wxBitmap GetBitmapResource(const wxString &name)

Retrieves bitmap resources.

void UpdateChildrenFeaturePanels(wxSizer *sizer)

wxCheckBox * m_RemoveProteins

void ProcessUpdateFeatEvent(wxCommandEvent &event)

~CRmDupFeaturesDlg()

Destructor.

CRmDupFeaturesDlg()

Constructors.

static const CFeatList * GetFeatList()

namespace ncbi::objects::

CRef< edit::CStringConstraint > GetStringConstraint()

IWorkbench is the central interface in the application framework.

iterator_bool insert(const value_type &val)

const_iterator find(const key_type &key) const

const_iterator end() const

#define EVT_UPDATE_FEATURE_LIST(id, fn)

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

CSeq_entry_Handle GetSeq_entry_Handle(void) const

Get parent Seq-entry handle.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

const TLocation & GetLocation(void) const

Get the Location member data.

constexpr bool empty(list< Ts... >) noexcept

const struct ncbi::grid::netcache::search::fields::SIZE size

#define ID_RM_DUP_FEATURES_OKCANCEL

C++ wrappers for the Perl-compatible regular expression (PCRE) library.

void GetProductToCDSMap(objects::CScope &scope, map< objects::CBioseq_Handle, set< objects::CSeq_feat_Handle > > &product_to_cds)

CRef< CCmdComposite > GetDeleteFeatureCommand(const objects::CSeq_feat_Handle &fh, bool remove_proteins=true)


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