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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/psl__object__loader_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/widgets/loaders/psl_object_loader.cpp Source File

: m_Params(params), m_FileNames(

)

;

wxFileName fileName(fn);

annot_name =

+

(fileName.GetFullName());

(

counter = 1;; ++counter) {

(lineReader.

() || !istream.good() || istream.eof())

seq_annot = reader.

(lineReader, errCont);

(

exception& e) {

string GetAssemblyAcc() const

bool GetUseMapping() const

void x_CreateMapper(const string &assembly)

void x_UpdateMap(objects::CSeq_annot &annot)

bool x_ShowMappingDlg(IObjectLoader::TObjects &objects)

CMapAssemblyParams GetMapAssembly() const

virtual CRef< CSeq_annot > ReadSeqAnnot(CNcbiIstream &istr, ILineErrorListener *pErrors=nullptr)

Read an object from a given input stream, render it as a single Seq-annot.

void x_ShowErrorsDlg(const wxString &title)

void x_UpdateHTMLResults(const wxString &object, objects::ILineErrorListener *errCont, const string &exception="", const string &error_msg="", const wxString &objectName=wxT("File:"))

Simple implementation of ILineReader for i(o)streams.

Interface for testing cancellation request in a long lasting operation.

vector< SObject > TObjects

const string & GetMsg(void) const

Get message string.

virtual const char * what(void) const noexcept

Standard report (includes full backlog).

virtual TObjects & GetObjects()

vector< wxString > m_FileNames

virtual bool PostExecute()

CPslObjectLoader(const CPslLoadParams &params, const vector< wxString > &filenames)

virtual string GetDescription() const

virtual bool Execute(ICanceled &canceled)

virtual bool PreExecute()

bool AtEOF(void) const

Indicates (negatively) whether there is any more input.

void Reset(void)

Reset reference object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

virtual bool IsCanceled(void) const =0

IO_PREFIX::istream CNcbiIstream

Portable alias for istream.

static enable_if< is_arithmetic< TNumeric >::value||is_convertible< TNumeric, Int8 >::value, string >::type NumericToString(TNumeric value, TNumToStringFlags flags=0, int base=10)

Convert numeric value to string.

Defines classes: CDirEntry, CFile, CDir, CSymLink, CMemoryFile, CFileUtil, CFileLock,...

string ToStdString(const wxString &s)

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