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NCBI C++ ToolKit: include/gui/widgets/phylo_tree/phylo_tree_render.hpp Source File

TTHH_NeedTooltip(

wxPoint & pt);

SetActiveTooltipNode(

);

PointToNode(

, wxRect tip_rect,

sec);

(v.first == m_Idx);

OnLeftDown(wxMouseEvent& event);

OnRightDown(wxMouseEvent& event);

OnLeftDblClick(wxMouseEvent& event);

OnLeftUp(wxMouseEvent& event);

OnMotion(wxMouseEvent& event);

OnTimer(wxTimerEvent& event);

OnTimerLeftUp(wxTimerEvent& event);

* GetTexture(

& xcoord_limit,

& ycoord_limit);

BufferedRender(

& pane,

init_collision_info=

,

select_edge=

);

InitCollisionInfo();

LabelsVisible();

DefaultNodeSize();

Redraw(

);

RemoveCurrentDataSource();

ComputeViewingLimits(

& pane,

force_square =

,

init_collision_info =

);

(

) {

m_DimX;}

(

) {

m_DimY;}

ComputeDistFromPixels(

& pane,

ComputeScale(

default_scale,

&

)

;

SetHighlightEdges(

enable);

height_factor = 1.0f,

wh_ratio = -1.0f);

GetMaxLeavesVisible();

x_WideLines();

, m_ProjectionCood(0.0f) {}

UpdateExtent(

node_coord,

() { m_Extents.clear(); }

DumpExtent(

& dim);

ConsolidateExtents(vector<ProjectionElement>& xexts,

vector<ProjectionElement>& yexts);

() { m_MaxX.Clear(); m_MaxY.Clear(); m_MinX.Clear(); m_MinY.Clear(); }

x_RenderLineVbo(

child_node_idx,

x_RenderLineVbo(

child_node_idx,

x_RenderSplineVbo(

child_node_idx,

x_RenderCircularVbo(

child_node_idx,

x_RenderPseudoSplineVbo(

child_node_idx,

circleSegments,

vector<float>& color_coords,

& layout_type);

std::vector<ProjectionElement>& xexts,

std::vector<ProjectionElement>& yexts,

max_iterations=500);

x_SetElementVisibility();

x_RenderSelection(

& pane);

x_RenderTooltipHints(

& pane);

x_RenderNodeHighlight(

& pane,

x_GenerateTexture(

);

x_OnMouseMove(

);

x_OnKeyDown(

);

x_OnKeyUp(

);

x_OnSelectCursor(

);

x_SelectByRect(

toggle);

x_ComputeEdgeHighlight();

, m_PixelHeight(0.0f)

, m_TotalHeight(0.0f)

(node.IsLeafEx()) {

node_size = 2.0f*(float)m_Clad->GetNodeLayoutSize(&node);

m_PixelHeight += node_size;

(m_FontHeight > node_size)

m_TotalHeight += m_FontHeight;

m_TotalHeight += node_size;

(!node.Expanded())

CGlVboNode A rendering node that holds a vertex buffer object.

CMouseZoomHandler provides support for mouse-driven zoom and pan operations.

const CGlTextureFont & GetFont(void) const

Tree subclass also has functions and data needed for rendering and selection.

vector< TSelStateValue > TSelState

class CRgbaColor provides a simple abstraction for managing colors.

virtual void SetPane(CGlPane *)

virtual wxEvtHandler * GetEvtHandler()=0

virtual float GetNodeLayoutSize(const CPhyloTreeNode *scheme) const

This is the height of the node for layout purposes.

virtual TVPUnit DistanceBetweenNodes(void) const =0

virtual float GetNodeLabelDist(const CPhyloTreeNode *n) const

virtual CPhyloTreeScheme & GetScheme(void)=0

virtual float GetDefaultNodeSize(const CPhyloTreeNode *n) const

virtual float GetNodeSize(const CPhyloTreeNode *n) const

This is a set of positions (for nodes) and associated x or y pixel offset values.

vector< ProjectionElement > m_Extents

Sorted (in decreasing order) set of coordinates and pixel offsets.

This class extracts for each of the 4 directions (+x,-x,+y,-y) the maximum coordinates to which any e...

CExtentDimension m_MinX

the 'leftmost' nodes, except that signs are flipped in order to allow uniform processing in all dimen...

CExtentDimension m_MaxY

Same as for m_MaxX values, but in y dimension.

CExtentDimension m_MinY

the 'bottommost' nodes, with signs flipped.

CExtentDimension m_MaxX

the 'rightmost' nodes and labels (includes the node with the largest x value, and any nodes to the le...

ETreeTraverseCode operator()(TTreeType &tree, TTreeType::TTreeIdx node_idx, int delta)

ComputePixelHeight(IPhyloTreeLOD *c)

CPhyloTree::TTreeIdx TTreeIdx

virtual void x_SetGlRenderOptions(CPhyloTreeDataSource &ds)

Set OpenGL rendering options that depend on layout chosen.

bool m_RenderScale

If true render a scale legend at the bottom of the screen.

void SetRenderingOption(TRenderingOption opt, bool bVal)

float m_TreePixels

Sum of size (height) of all leaf nodes in pixels, without considering labels (accomodates nodes that ...

void SetZoomHandler(CMouseZoomHandler *mz)

virtual bool SupportsDistanceRendering() const

void SetDistanceBarLowerLeft(bool b)

float m_ClosestEdgeDistSq

bool GetForceSquare(void) const

bool m_DistanceBarLowerLeft

CGlTextureFont * m_pLabelFont

float m_LabelViewPct

When sizing the tree to window, this is the maximum % of screen area (width) that will be allocated t...

CPhyloTree::TNodeType TNodeType

bool GetDistRendering(void) const

CVect2< float > m_RightClick

bool GetSplinesRendering(void) const

@ eSelRect

selecting a single glyph by point

CRef< CPhyloTreeScheme > m_SL

std::vector< CVect2< float > > m_SelectedEdge

Graphical representation of currently selected edge, if any, and data members needed for the selectio...

CPhyloTree::TSelState m_NodeSingleSelection

When user only wants to display a single, current selection from the selection set (including traced ...

void x_DrawBoundingAreasVbo(CPhyloTreeNode *node)

virtual void NeedsLayout(ELayoutStatus s)

void SetLabelViewPct(float pct)

void SetRenderScale(bool s)

TTreeIdx m_ActiveTooltipNode

CPhyloTreeLabel m_LabelExt

virtual float GetLabelViewPct() const

CVect2< float > m_ClosestEdgeDir

float m_HighlightFunctionK

Parms for logistics function to highlight edges when zoomed out to the point that many edges overlap ...

virtual string GetDescription(void)=0

float m_BufferdRenderTime

For performance analysis (time to update VBOs after topology change)

ELabelAlign

label alignment

virtual void x_Render(CGlPane &pane, CPhyloTreeDataSource &ds)

CIRef< I3DFrameBuffer > m_MinimapBuffer

virtual bool SupportsRotatedLabels() const

virtual void x_RenderVbo(CPhyloTreeDataSource &)

const double GetDimX(void)

bool GetHighlightEdges() const

float GetTreeHeight() const

Get sum of pixel size of all leaf nodes.

const double GetDimY(void)

bool m_HighlightLongerEdges

If true, highlight longer edges when zoomed out.

CGlCurve< CCurveBezier > m_Curve

void SetRegenerateTexture(bool flag)

wxTimer m_MouseSingleTimer

If user is double clicking, want to avoid mouse single-click actions.

CGlPane * m_pPane

event handling

float m_HighlightIntensity

virtual void x_Layout(CPhyloTreeDataSource &ds)

void SetModelDimensions(double width, double height)

CPhyloTree::TSelState & GetSingleSelection()

virtual ELayoutStatus ValidLayout() const

float m_LabelPixels

Height of tree in pixels when labels are displayed.

CIRef< I3DTexture > m_Texture

virtual TModelUnit x_GetVerticalSeparationFactor() const

layout-spefic constant for label vertical sepatation needed for visibility

void SetSplinesRendering(bool flag)

void SetFont(CGlTextureFont *font)

bool GetRotatedLabels(void) const

bool GetRenderScale() const

ELayoutStatus m_ValidLayout

TModelRect m_ZoomableExtent

float m_HighlightFunctionMidpoint

void SetDistRendering(bool flag)

CProjectionExtents m_ProjectionExtents

void x_InitCollisionInfo()

CPhyloTreeDataSource * m_DS

bool m_MoveDuringSelection

CPhyloTreeScheme & GetScheme(void)

void SetRotatedLabels(bool flag)

wxMouseEvent m_LastMouseEvent

event info from last mouse click - used for single click processing

std::vector< NodePointer > m_NodePointers

IPhyloTreeRenderHost * m_pHost

void SetForceSquare(bool flag)

virtual bool IsDistanceBarLowerLeft() const

bool GetRegenerateTexture(void) const

virtual void StartRendering(bool b)

Allow caller to indicate layout has changed from one type to another (e.g.

CMouseZoomHandler * m_pMouseZoomHandler

static const TDS_WORD limits[]

unsigned int GetFontSize() const

TObjectType & GetObject(void)

Get object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

ETreeTraverseCode

Tree traverse code returned by the traverse predicate function.

@ eTreeTraverse

Keep traversal.

@ eTreeTraverseStepOver

Do not traverse current node (pick the next one)

#define NCBI_GUIWIDGETS_PHYLO_TREE_EXPORT

double value_type

The numeric datatype used by the parser.

The NCBI C++/STL use hints.

Defines: CTimeFormat - storage class for time format.

Int4 delta(size_t dimension_, const Int4 *score_)

Predicate to find location of a node in above selection set.

CPhyloTree::TTreeIdx m_Idx

bool operator()(const CPhyloTree::TSelState::value_type &v)

FindSelState(CPhyloTree::TTreeIdx node_idx)

Structure holds a 'pointer' from an active tooltip to its corresponding node.

wxRect m_TipRect

Rectangle defining tooltip in screen coords.

CPhyloTreeNode::TTreeIdx m_NodeIdx

Pointer to the node with id m_NodeID.

TModelPoint m_TipCenter

Center of tooltip widget, in screen coords with (0,0) in lower left.

CPhyloTree::TID m_NodeID

ID of the node to point to.

CStopWatch m_Timer

Timer to track duration of arrow display.

A coord (in one of +x,-x,+y,-y) and pixel offset in the same direction.

float m_ProjectionCood

Given a particular visible area and viewport size, position to which this node projects inside the vi...

float m_NodeCoord

Node x or y position depending on whether this extent is vert. or horiz.

float m_PixelOffset

Pixel offset (direction +x,-x,+y,-y) relative to the x or y position above.

ProjectionElement(float p, float o)

size_t TTreeIdx

Bi-directionaly linked N way tree allocated in a contiguous memory block.

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