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NCBI C++ ToolKit: include/gui/widgets/phylo_tree/phylo_tree_query_exec.hpp Source File

, m_TopologyChange(

)

, m_NodeBranchDepth(0)

, m_NodeMaxChildBranchDepth(-1)

, m_DisableUndo(

)

, m_EvalDo(

) {}

GetFeatureIdNoCase(

& feature_name,

(macro::CMacroRep& m);

x_ClearBuiltInFunctions();

x_EvalAdvance();

, m_Iterator(

->SubNodeBegin())

, m_MaxChildBranchDepth(-1) {}

Things for representing and manipulating bio trees.

virtual bool EvalNext(macro::CMacroRep &)

virtual void GetFunctionNames(macro::CMacroParser &parser) const

Tree subclass also has functions and data needed for rendering and selection.

Query tree and associated utility methods.

TNodeList::iterator TNodeList_I

definition of a Culling tree

std::stack< PhyloTreePointer > m_NodeStack

stack of visited nodes up the tree

CPhyloTree::TTreeIdx TTreeIdx

const CBioTreeFeatureDictionary * m_Dictionary

Dictionary of 'features' for the tree.

std::vector< TTreeIdx > m_Selected

current set of selected nodes from the query

CTreeQueryExec(const CBioTreeFeatureDictionary *d)

TBuiltInFunctionsMap m_BuiltInFunctions

functions

int m_NodeMaxChildBranchDepth

Number of branches between the current node and it's most distant (by branch count) child.

bool GetTopologyChange() const

int m_NodeBranchDepth

Depth in tree as an integer - number of branches between current node and root.

bool m_TopologyChange

If true topology changed (e.g. a node was deleted)

virtual CQueryParseNode::EType IdentifierType(const std::string &)

Some applications may know the type of an identifier.

std::vector< TTreeIdx > GetTreeSelected() const

bool m_EvalDo

Flag indicates if the work should be performed on the Do clause.

CRef< CSelectionSetEdit > m_SelectionSetEdit

Undo-redo buffer for selection sets (which are stored in biotreecontainer user data)

CFeatureEdit * GetFeatureEdit()

TTreeIdx m_EvalNode

Node currently being evaluated.

bool m_DisableUndo

To disable use of undo buffer (m_FeatureEdit)

CRef< CFeatureEdit > m_FeatureEdit

The undo/redo buffer for node properties.

CSelectionSetEdit * GetSelectionEdit()

map< string, ITreeMacroFunction * > TBuiltInFunctionsMap

CRef< CMacroCmdComposite > m_CmdComposite

CPhyloTree::TNodeType TNodeType

Base class for functions which can be called from the WHERE or DO clauses of macros/queries using the...

int64_t Int8

8-byte (64-bit) signed integer

virtual bool EvalComplete()

virtual TFieldID GetIdentifier(const std::string &)

virtual bool ResolveIdentifier(const std::string &, bool &)

If query has an identifier, this will resolve it in an application-specific way.

virtual void CallFunction(const string &name, CQueryParseTree::TNode &node)

Extend this function to look up and invoke functions that appear in the query.

virtual bool HasIdentifier(const std::string &)

@ eNotSet

Produced by the (private) default constructor.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

unsigned int TBioTreeFeatureId

Feature Id.

#define NCBI_GUIWIDGETS_PHYLO_TREE_EXPORT

Interface class for macro function implementation.

const GenericPointer< typename T::ValueType > T2 value

Query parser execution implementations.

Edits for one or more nodes.

Edits for one or more nodes.

for iterating through the node tree without recursion

PhyloTreePointer(TNodeType *n)

TNodeType::TNodeList_I m_Iterator

int m_MaxChildBranchDepth

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