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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/objostrjson_8cpp_source.html below:

NCBI C++ ToolKit: src/serial/objostrjson.cpp Source File

55 #define NCBI_USE_ERRCODE_X Serial_OStream 70

m_FileHeader(

false

),

71

m_BlockStart(

false

),

72

m_ExpectValue(

false

),

73

m_PreserveKeys(

false

),

84

m_FileHeader(

false

),

85

m_BlockStart(

false

),

86

m_ExpectValue(

false

),

87

m_PreserveKeys(

false

),

145  if

(!

type

->GetName().empty()) {

254  in

.ReadStringStore(s);

301  string

obj_name = obj.

GetName

();

302  if

(obj_name.empty()) {

306  if

(obj_name.empty()) {

311  const

vector<CSerialAttribInfoItem>& attlist = obj.

GetAttributes

();

312  if

(attlist.empty()) {

317

vector<CSerialAttribInfoItem>::const_iterator it;

318  for

( it = attlist.begin(); it != attlist.end(); ++it) {

331  in

.ReadAnyContentObject(obj);

339 #if BITSTRING_AS_VECTOR 340  static const char

ToHex[] =

"0123456789ABCDEF"

;

343  for

( CBitString::const_iterator

i

= obj.begin(); !

done

; ) {

355

CBitString::statistics

st

;

357  char

*

buf

= (

char

*)

malloc

(

st

.max_serialize_mem);

366  for

(;

i

< ilast; ++

i

) {

495  if

(

id

.HasNotag() ||

id

.IsAttlist()) {

497  if

(

id

.HasAnyContent()) {

508  auto

tn = [

this

]()->

const string

& {

517  if

(

id

.HasAnyContent()) {

552  if

(

id

.HasNotag() ||

id

.IsAttlist()) {

570 static const char

*

const HEX

=

"0123456789ABCDEF"

;

586  const char

* bytes,

size_t

length)

617  const size_t

chunk_in = 57;

618  const size_t

chunk_out = 80;

619  if

(length > chunk_in &&

m_WrapAt

!= 0) {

622  char

dst_buf[chunk_out];

623  size_t

bytes_left = length;

624  size_t

src_read=0, dst_written=0, line_len=0;

625  while

(bytes_left > 0 && bytes_left <= length) {

627

dst_buf, chunk_out, &dst_written, &line_len);

629

bytes_left -= src_read;

631  if

(bytes_left > 0 &&

m_WrapAt

!= 0) {

635  if

(length > chunk_in &&

m_WrapAt

!= 0) {

642  while

( length-- > 0 ) {

664  while

( length-- > 0 ) {

705  const char

*

,

size_t

)

741  if

( (

unsigned int

)c < 0x20 ||

745  unsigned

hi = ch >> 4;

746  unsigned

lo = ch & 0xF;

765  for

( string::const_iterator

t

=

tmp

.begin();

t

!=

tmp

.end(); ++

t

) {

774  for

(

const char

* src =

value

.c_str(); *src; ++src) {

ncbi::TMaskedQueryRegions mask

Serializable object that stores any combination of parsable data.

CTempString implements a light-weight string on top of a storage buffer whose lifetime management is ...

CTypeInfo class contains all information about C++ types (both basic and classes): members and layout...

size_type size() const noexcept

Returns bvector's capacity (number of bits it can store)

bvector_size_type size_type

enumerator first() const

Returns enumerator pointing on the first non-zero bit.

enumerator end() const

Returns enumerator pointing on the next bit after the last.

void calc_stat(struct bm::bvector< Alloc >::statistics *st) const noexcept

Calculates bitvector statistics.

Include a standard set of the NCBI C++ Toolkit most basic headers.

std::ofstream out("events_result.xml")

main entry point for tests

static const char * str(char *buf, int n)

@ eTakeOwnership

An object can take ownership of another.

@ eNoOwnership

No ownership is assumed.

#define finite

Define value of finite (Is Finite).

const string & GetName(void) const

const string & FindNameEx(TEnumValueType value, bool allowBadValue) const

bool IsInteger(void) const

Check whether the type is defined as INTEGER in ASN.1 spec.

const CStringUTF8 & GetValue(void) const

Get normalized value.

const void * TConstObjectPtr

const string & GetName(void) const

Get local name.

const vector< CSerialAttribInfoItem > & GetAttributes(void) const

Get object attributes.

@ eStringTypeUTF8

UTF8-encoded string.

virtual void WriteString(const string &s, EStringType type=eStringTypeVisible) override

virtual void CopyStringStore(CObjectIStream &in) override

virtual void WriteFileHeader(TTypeInfo type) override

EBinaryDataFormat

formatting of binary data ('OCTET STRING', 'hexBinary', 'base64Binary')

void GetJsonpPadding(string *prefix, string *suffix) const

Get JSONP padding (prefix and suffix)

virtual void BeginContainerElement(TTypeInfo elementType) override

MLIOVIR void WriteClassMemberSpecialCase(const CMemberId &memberId, TTypeInfo memberType, TConstObjectPtr memberPtr, ESpecialCaseWrite how)

void WriteClassMember(const CConstObjectInfoMI &member)

void WriteDouble2(double data, unsigned digits)

virtual void WriteSeparator(void) override

virtual void EndContainer(void) override

EBinaryDataFormat GetBinaryDataFormat(void) const

Get formatting of binary data.

virtual void CopyAnyContentObject(CObjectIStream &in) override

virtual void WriteOtherEnd(TTypeInfo typeInfo) override

static TTypeInfo GetRealTypeInfo(TTypeInfo typeInfo)

virtual string GetPosition(void) const override

Get current stream position as string.

virtual void WriteAnyContentObject(const CAnyContentObject &obj) override

void WriteEscapedChar(char c, EEncoding enc_in)

virtual void EndBytes(const ByteBlock &block) override

#define ThrowError(flag, mess)

void SetJsonpMode(const string &function_name)

Set JSONP mode JSONP prefix will become "function_name(" JSONP suffix will become ");".

void WriteCustomBytes(const char *bytes, size_t length)

virtual void EndClass(void) override

virtual void EndChoice(void) override

bool IsCompressed(void) const

virtual ~CObjectOStreamJson(void)

Destructor.

virtual void WriteInt4(Int4 data) override

virtual void WriteNull(void) override

virtual void WriteUint8(Uint8 data) override

void x_WriteString(const string &value, EStringType type=eStringTypeVisible)

void WriteKeywordValue(const string &value)

EEncoding m_StringEncoding

virtual void BeginNamedType(TTypeInfo namedTypeInfo)

virtual void EndNamedType(void) override

void SetNotag(bool set=true)

void WriteEncodedChar(const char *&src, EStringType type)

void WriteMemberId(const CMemberId &id)

TFrame & FetchFrameFromTop(size_t index)

virtual void EndOfWrite(void) override

virtual void BeginChoiceVariant(const CChoiceTypeInfo *choiceType, const CMemberId &id) override

virtual void BeginContainer(const CContainerTypeInfo *containerType) override

virtual void WriteOther(TConstObjectPtr object, TTypeInfo typeInfo) override

void WriteKey(const string &key)

size_t GetStackDepth(void) const

virtual void BeginChoice(const CChoiceTypeInfo *choiceType) override

virtual void WriteFloat(float data) override

void WriteValue(const string &value, EStringType type=eStringTypeVisible)

const TFrame & TopFrame(void) const

static CObjectOStream * OpenObjectOStreamJson(CNcbiOstream &out, EOwnership deleteOut)

virtual void WriteStringStore(const string &s) override

virtual void WriteBool(bool data) override

virtual void EndOfWrite(void)

virtual void WriteChar(char data) override

virtual void WriteEnum(const CEnumeratedTypeValues &values, TEnumValueType value) override

virtual void CopyBitString(CObjectIStream &in) override

EBinaryDataFormat m_BinaryFormat

CObjectOStreamJson(CNcbiOstream &out, bool deleteOut)

Constructor.

bool GetWriteNamedIntegersByValue(void) const

Get writing named integers by value parameter.

bool StackIsEmpty(void) const

const CMemberId & GetMemberId(void) const

virtual void EndContainerElement(void) override

virtual void BeginClassMember(const CMemberId &id) override

virtual void WriteBytes(const ByteBlock &block, const char *bytes, size_t length) override

virtual void BeginNamedType(TTypeInfo namedTypeInfo) override

virtual void EndClassMember(void) override

virtual void WriteCString(const char *str) override

EEncoding GetDefaultStringEncoding(void) const

Get default encoding of 'string' objects.

virtual void WriteChars(const CharBlock &block, const char *chars, size_t length) override

virtual void WriteBitString(const CBitString &obj) override

EFrameType GetFrameType(void) const

void SetBinaryDataFormat(EBinaryDataFormat fmt)

Set formatting of binary data.

bool m_WriteNamedIntegersByValue

void WriteSkippedMember(void)

virtual void CopyString(CObjectIStream &in, EStringType type=eStringTypeVisible) override

virtual void EndChoiceVariant(void) override

virtual void CopyEnum(const CEnumeratedTypeValues &values, CObjectIStream &in) override

virtual void WriteInt8(Int8 data) override

virtual void WriteNullPointer(void) override

virtual void WriteUint4(Uint4 data) override

virtual void EndNamedType(void)

virtual void BeginBytes(const ByteBlock &block) override

virtual void WriteObjectReference(TObjectIndex index) override

virtual void WriteDouble(double data) override

virtual void WriteOtherBegin(TTypeInfo typeInfo) override

void WriteBase64Bytes(const char *bytes, size_t length)

bool m_EnforceWritingDefaults

void SetDefaultStringEncoding(EEncoding enc)

Set default encoding of 'string' objects.

virtual void BeginClass(const CClassTypeInfo *classInfo) override

@ eString_01B

string of 0 and 1, plus 'B' at the end

@ eArray_Uint

array of unsigned integers

@ eArray_Bool

array of 'true' and 'false'

@ eArray_01

array of 1 and 0

@ eString_Hex

HEX string.

@ eString_Base64

Base64Binary string.

@ eString_01

string of 0 and 1

@ fInvalidData

Output data is incorrect.

@ fNotImplemented

Method is not implemented.

uint8_t Uint1

1-byte (8-bit) unsigned integer

int32_t Int4

4-byte (32-bit) signed integer

uint32_t Uint4

4-byte (32-bit) unsigned integer

int64_t Int8

8-byte (64-bit) signed integer

uint64_t Uint8

8-byte (64-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

void IncIndentLevel(size_t step=2)

bool GetUseIndentation(void) const

size_t GetLine(void) const

void PutString(const char *str, size_t length)

void PutEol(bool indent=true)

void WrapAt(size_t lineLength, bool keepWord)

void DecIndentLevel(size_t step=2)

IO_PREFIX::ostream CNcbiOstream

Portable alias for ostream.

static string SizetToString(size_t value, TNumToStringFlags flags=0, int base=10)

Convert size_t to string.

static string Int8ToString(Int8 value, TNumToStringFlags flags=0, int base=10)

Convert Int8 to string.

static string DoubleToString(double value, int precision=-1, TNumToStringFlags flags=0)

Convert double to string.

static string IntToString(int value, TNumToStringFlags flags=0, int base=10)

Convert int to string.

static SIZE_TYPE DoubleToStringPosix(double value, unsigned int precision, char *buf, SIZE_TYPE buf_size)

Convert double to string with specified precision and put the result into a character buffer,...

static CStringUTF8 AsUTF8(const CTempString &src, EEncoding encoding, EValidate validate=eNoValidate)

Convert into UTF8 from a C/C++ string.

static string UIntToString(unsigned int value, TNumToStringFlags flags=0, int base=10)

Convert UInt to string.

static string & ReplaceInPlace(string &src, const string &search, const string &replace, SIZE_TYPE start_pos=0, SIZE_TYPE max_replace=0, SIZE_TYPE *num_replace=0)

Replace occurrences of a substring within a string.

static string UInt8ToString(Uint8 value, TNumToStringFlags flags=0, int base=10)

Convert UInt8 to string.

@ fDoublePosix

DoubleToString*(): Use C locale for double conversions.

const string & GetName(void) const

Get name of this type.

TTypeInfo GetElementType(void) const

enum ENcbiOwnership EOwnership

Ownership relations between objects.

size_t serialize(const BV &bv, unsigned char *buf, bm::word_t *temp_block=0, unsigned serialization_flags=0)

Saves bitvector into memory.

Definition of all error codes used in serial libraries (xser.lib, xcser.lib).

void aligned_free(void *ptr) BMNOEXCEPT

Aligned free.

void * aligned_new_malloc(size_t size)

Aligned malloc (unlike classic malloc it throws bad_alloc exception)

const unsigned set_block_alloc_size

const struct ncbi::grid::netcache::search::fields::KEY key

const GenericPointer< typename T::ValueType > T2 value

std::istream & in(std::istream &in_, double &x_)

double r(size_t dimension_, const Int4 *score_, const double *prob_, double theta_)

static const char *const HEX

static SLJIT_INLINE sljit_ins st(sljit_gpr r, sljit_s32 d, sljit_gpr x, sljit_gpr b)


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