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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/obj__fingerprint_8hpp_source.html below:

NCBI C++ ToolKit: include/gui/objutils/obj_fingerprint.hpp Source File

1 #ifndef GUI_OBJUTILS___OBJ_FINGERPRINT__HPP 2 #define GUI_OBJUTILS___OBJ_FINGERPRINT__HPP 60  static void

Register(

TTypeInfo

type_info, TFingerPFunc func);

63

objects::CScope* scope =

NULL

);

67  static void

AddInteger(

CChecksum

& checksum,

unsigned char

* pvalue,

int size

);

104  static string

GetFeatSignature(

const

objects::CSeq_feat& feat,

105

objects::CScope* scope,

106  const string

& data_source =

""

,

107  const string

& sAdditionalInfo =

""

);

109  static string

GetFeatSignature(

const

objects::CSeq_feat& feat,

110

objects::CScope* scope,

111  const

objects::CSeq_annot_Handle& annot_handle,

112  const string

& sAdditionalInfo =

""

);

115  static string

GetFeatSignature(

const

objects::CSeq_feat& feat,

116  const

objects::CSeq_loc& loc,

117

objects::CScope* scope,

118  const

objects::CSeq_annot_Handle& annot_handle,

119  const string

& sAdditionalInfo =

""

);

122  static string

GetFeatSignature(

const

objects::CSeq_feat& feat,

123  const

objects::CSeq_loc& loc,

124

objects::CScope* scope,

125  const string

& data_source =

""

,

126  const string

& sAdditionalInfo =

""

);

128  static string

GetGraphSignature(

const

objects::CSeq_graph& graph,

129

objects::CScope* scope,

130  const string

& data_source =

""

);

132  static string

GetSeqLocSignature(

const

objects::CSeq_loc& loc,

133

objects::CScope* scope);

135  static string

GetHistogramSignature(

const

objects::CSeq_loc& loc,

136

EObjectType obj_type,

137

objects::CScope* scope,

138  const string

& title,

139  const string

& data_source =

""

,

142  static string

GetComponentSignature(

const

objects::CSeq_loc& comp_loc,

143  const

objects::CSeq_loc& mapped_loc,

144

objects::CScope* scope);

146  static string

GetAlignSignature(

const

objects::CSeq_align& align,

147  const

objects::CSeq_loc& on_loc,

148

objects::CScope* scope,

149  const

objects::CSeq_annot_Handle& annot_handle);

151  static string

GetAlignSignature(

const

objects::CSeq_align& align,

152  const

objects::CSeq_loc& on_loc,

153

objects::CScope* scope,

154  const string

& data_source =

""

);

156  static string

GetRsiteSignature(

const

objects::CSeq_feat& feat,

158

objects::CScope* scope);

160  static string

GetVcfVariantSignature(

const

objects::CVcfVariant& vcf_variant, objects::CScope* scope);

164  static void

ParseSignature(

const string

& sig,

165

objects::CSeq_id_Handle& sih,

171  Uint4

& ds_fingerprint,

173

objects::CScope* scope);

176  static string

ParseSignatureDS(

const string

& sig);

179

objects::CSeq_id_Handle

sih

;

189  static void

ParseSignature(

const string

& sig, SFingerprint&

fp

, objects::CScope* scope);

193  void

x_Register(

TTypeInfo

type_info, TFingerPFunc func);

209  "id="

<<

fp

.sih.GetSeqId()->AsFastaString()

210

<<

" from="

<<

fp

.from

212

<<

" type="

<<

fp

.type

213

<<

" subtype="

<<

fp

.subtype

214

<<

" fingerprint="

<<

fp

.fingerprint

215

<<

" ds_fingerprint="

<<

fp

.ds_fingerprint;

CChecksum – Checksum calculator.

static void ParseSignature(const string &sig, objects::CSeq_id_Handle &sih, TSeqPos &from, TSeqPos &to, EObjectType &type, int &subtype, Uint4 &fingerprint, Uint4 &ds_fingerprint, string &ds_name, objects::CScope *scope)

parse signature with data source info.

map< TTypeInfo, TFingerPFunc > TMap

namespace ncbi::objects::

CTypeInfo class contains all information about C++ types (both basic and classes): members and layout...

unsigned int TSeqPos

Type for sequence locations and lengths.

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

#define NCBI_GUIOBJUTILS_EXPORT

Defines to provide correct exporting from DLLs in Windows.

const struct ncbi::grid::netcache::search::fields::SIZE size

const GenericPointer< typename T::ValueType > T2 value

uint64_t Fingerprint(uint128_t x)

ostream & operator<<(ostream &os, const CObjFingerprint::SFingerprint &fp)

objects::CSeq_id_Handle sih

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