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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/ngalign__tool_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/packages/pkg_alignment/ngalign_tool.cpp Source File

,

,

,

),

m_Panel(), m_BLASTPanel(), m_CurrentPage(0)

;

;

(panel->Validate() && panel->TransferDataFromWindow()) {

panel->TransferDataToWindow();

( !gui_seq_info.

() && gui_seq_info->IsDNA() ){

CDataLoadingAppJob - a base class for Jobs loading data into projects.

virtual void LoadSettings()

CNGAlignParams & GetData()

virtual bool TransferDataFromWindow()

virtual bool TransferDataToWindow()

IRegSettings An interface for objects that save / restore settings using CGuiRegistry.

static DLIST_TYPE *DLIST_NAME() next(DLIST_LIST_TYPE *list, DLIST_TYPE *item)

#define NON_CONST_ITERATE(Type, Var, Cont)

Non constant version of ITERATE macro.

virtual IRegSettings * x_GetParamsAsRegSetting()

return a pointer to Parameters object as IRegSettings interface

virtual CAlgoToolManagerParamsPanel * x_GetParamsPanel()

returns a pointer to the parameters panel, override in derived classes

void SetObjects(TConstScopedObjects *objects)

bool x_IsLastPage() const

virtual void SaveSettings() const

override in derived classes

const SConstScopedObject & GetSubject() const

virtual wxPanel * GetCurrentPanel()

Return the panel corresponding to the current state of Tool Manager.

virtual string GetExtensionLabel() const

returns a displayable label for this extension ( please capitalize the key words - "My Extension" )

virtual bool DoTransition(EAction action)

Performs transition if possible and returns true, otherwise the function shall warn the user about th...

virtual void x_SelectCompatibleInputObjects()

SConstScopedObject & SetSubject()

CNGAlignTool()

CNGAlignTool.

virtual void CleanUI()

override this function in a derived class and clean extra members

TConstScopedObjects & SetQueries()

virtual CDataLoadingAppJob * x_CreateLoadingJob()

factory method for creating the job that executes the tool algorithm override in derived classes

bool x_IsFirstPage() const

virtual bool x_ValidateParams()

validates user input in Parameters panel, report errors if any

virtual bool x_CreateParamsPanelIfNeeded()

returns / creates Parameters panel, override in derived classes see cpp file for example

CNGAlignBLASTPanel * m_BLASTPanel

virtual string GetExtensionIdentifier() const

returns the unique human-readable identifier for the extension the id should use lowercase letters se...

virtual bool IsFinalState()

True if Tool Manager has reached its final state, i.e.

virtual void InitUI()

override this function in a derived class and initialize extra members

TConstScopedObjects m_SeqIds

virtual void LoadSettings()

void x_CreateBALSTPanelIfNeeded()

wxPanel * x_GetCurrentPage()

const TConstScopedObjects & GetQueries() const

void NcbiErrorBox(const string &message, const string &title="Error")

specialized Message Box function for reporting critical errors

vector< SConstScopedObject > TConstScopedObjects

bool IsNull(void) const THROWS_NONE

Check if pointer is null – same effect as Empty().

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

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