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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/muscle__tool__panel_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/packages/pkg_alignment/muscle_tool_panel.cpp Source File

40 #include <wx/stattext.h> 41 #include <wx/choice.h> 42 #include <wx/bmpbuttn.h> 43 #include <wx/checkbox.h> 44 #include "wx/valgen.h" 45 #include "wx/valtext.h" 46 #include <wx/msgdlg.h> 47 #include <wx/filedlg.h> 48 #include <wx/filename.h> 49 #include <wx/artprov.h> 51 #include "wx/bitmap.h" 78  Create

(parent,

id

, pos,

size

, style, visible);

83

SetExtraStyle(wxWS_EX_VALIDATE_RECURSIVELY);

85

CAlgoToolManagerParamsPanel::Create( parent,

id

, pos,

size

, style );

94

GetSizer()->SetSizeHints(

this

);

120

wxBoxSizer* itemBoxSizer2 =

new

wxBoxSizer(wxVERTICAL);

121

itemCAlgoToolManagerParamsPanel1->SetSizer(itemBoxSizer2);

126

wxBoxSizer* itemBoxSizer4 =

new

wxBoxSizer(wxHORIZONTAL);

127

itemBoxSizer2->Add(itemBoxSizer4, 0, wxALIGN_RIGHT|wxALL, 0);

129

wxStaticText* itemStaticText5 =

new

wxStaticText( itemCAlgoToolManagerParamsPanel1, wxID_STATIC,

_

(

"Scoring method"

), wxDefaultPosition, wxDefaultSize, 0 );

130

itemBoxSizer4->Add(itemStaticText5, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

132

wxArrayString itemChoice6Strings;

133

itemChoice6Strings.Add(

_

(

"log-expectation score (default)"

));

134

itemChoice6Strings.Add(

_

(

"PAM200"

));

135

itemChoice6Strings.Add(

_

(

"VTML240"

));

136

wxChoice* itemChoice6 =

new

wxChoice( itemCAlgoToolManagerParamsPanel1,

ID_CHOICE2

, wxDefaultPosition, wxDefaultSize, itemChoice6Strings, 0 );

137

itemChoice6->SetStringSelection(

_

(

"log-expectation score (default)"

));

138

itemBoxSizer4->Add(itemChoice6, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

140

wxCheckBox* itemCheckBox7 =

new

wxCheckBox( itemCAlgoToolManagerParamsPanel1,

ID_CHECKBOX12

,

_

(

"Generate reconstructed tree from alignment"

), wxDefaultPosition, wxDefaultSize, 0 );

141

itemCheckBox7->SetValue(

false

);

142

itemBoxSizer2->Add(itemCheckBox7, 0, wxALIGN_LEFT|wxALL, 5);

144

wxBoxSizer* itemBoxSizer8 =

new

wxBoxSizer(wxHORIZONTAL);

145

itemBoxSizer2->Add(itemBoxSizer8, 0, wxGROW|wxALL, 0);

147

wxStaticText* itemStaticText9 =

new

wxStaticText( itemCAlgoToolManagerParamsPanel1, wxID_STATIC,

_

(

"Command line options"

), wxDefaultPosition, wxDefaultSize, 0 );

148

itemBoxSizer8->Add(itemStaticText9, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

150

wxTextCtrl* itemTextCtrl10 =

new

wxTextCtrl( itemCAlgoToolManagerParamsPanel1,

ID_TEXTCTRL11

, wxEmptyString, wxDefaultPosition, wxDefaultSize, 0 );

151

itemBoxSizer8->Add(itemTextCtrl10, 1, wxALIGN_CENTER_VERTICAL|wxALL, 5);

153

wxBoxSizer* itemBoxSizer11 =

new

wxBoxSizer(wxHORIZONTAL);

154

itemBoxSizer2->Add(itemBoxSizer11, 0, wxGROW|wxALL, 0);

156

wxStaticText* itemStaticText12 =

new

wxStaticText( itemCAlgoToolManagerParamsPanel1, wxID_STATIC,

_

(

"Path to executable"

), wxDefaultPosition, wxDefaultSize, 0 );

157

itemBoxSizer11->Add(itemStaticText12, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

159

wxTextCtrl* itemTextCtrl13 =

new

wxTextCtrl( itemCAlgoToolManagerParamsPanel1,

ID_TEXTCTRL12

, wxEmptyString, wxDefaultPosition, wxDefaultSize, 0 );

160

itemBoxSizer11->Add(itemTextCtrl13, 1, wxALIGN_CENTER_VERTICAL|wxALL, 5);

162

wxBitmapButton* itemBitmapButton14 =

new

wxBitmapButton( itemCAlgoToolManagerParamsPanel1,

ID_BITMAPBUTTON1

, itemCAlgoToolManagerParamsPanel1->

GetBitmapResource

(

wxT

(

"menu::open"

)), wxDefaultPosition, wxDefaultSize, wxBU_AUTODRAW );

163

itemBitmapButton14->SetHelpText(

_

(

"Select MUSCLE executable"

));

165

itemBitmapButton14->SetToolTip(

_

(

"Select MUSCLE executable"

));

166

itemBoxSizer11->Add(itemBitmapButton14, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

169

itemChoice6->SetValidator( wxGenericValidator(&

GetData

().m_ScoringMethod) );

170

itemCheckBox7->SetValidator( wxGenericValidator(&

GetData

().m_GenerateTree) );

171

itemTextCtrl10->SetValidator( wxTextValidator(wxFILTER_NONE, &

GetData

().m_CommandLine) );

195  return

wxArtProvider::GetBitmap(name);

209  if

(!CAlgoToolManagerParamsPanel::TransferDataFromWindow())

237

wxTextCtrl* textCtrl =

dynamic_cast<

wxTextCtrl*

>

(FindWindow(

ID_TEXTCTRL12

));

238  _ASSERT

(

nullptr

!= textCtrl);

240

wxString path = textCtrl->GetValue();

242

wxFileDialog dlg(

this

,

wxT

(

"Select a file"

),

wxT

(

""

),

wxT

(

""

),

wxT

(

"*"

),

243

wxFD_OPEN|wxFD_FILE_MUST_EXIST);

247  if

(dlg.ShowModal() != wxID_OK)

250

path = dlg.GetPath();

251

textCtrl->SetValue(path);

257

TransferDataToWindow();

virtual bool TransferDataFromWindow()

wxIcon GetIconResource(const wxString &name)

virtual void LoadSettings()

void RestoreDefaults()

override in derived classes

void OnMusclePathClick(wxCommandEvent &event)

CMuscleToolParams & GetData()

bool Create(wxWindow *parent, wxWindowID id=ID_CMUSCLEPANEL, const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxSize(400, 300), long style=wxTAB_TRAVERSAL, bool visible=true)

virtual void SaveSettings() const

override in derived classes

CObjectListWidgetSel * m_LocationSel

void SetObjects(map< string, TConstScopedObjects > *objects)

wxBitmap GetBitmapResource(const wxString &name)

static bool ShowToolTips()

TConstScopedObjects & SetObjects()

virtual void SetRegistryPath(const string &path)

CAlgoToolManagerParamsPanel.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

const struct ncbi::grid::netcache::search::fields::SIZE size

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