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NCBI C++ ToolKit: src/algo/ms/omssa/msmerge.hpp File Reference

#include <iostream>
#include <deque>
#include <map>
#include <corelib/ncbistr.hpp>
#include <corelib/ncbiexpt.hpp>
#include <objects/omssa/MSSearch.hpp>
#include "msms.hpp"

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Classes class   COMSSASearch   Typedefs typedef std::set< int >  TOid   type that hold a list of oids More...
  Functions CObjectOStream *  SetUpOutputFile (CObjectOStream *os, ESerialDataFormat DataFormat)   sets up output file based on DataFormat in particular, initializes xml stream appropriately More...
  Typedef Documentation ◆ TOid typedef std::set<int> TOid

type that hold a list of oids

Definition at line 52 of file msmerge.hpp.

Function Documentation ◆ SetUpOutputFile() CObjectOStream* SetUpOutputFile ( CObjectOStream *  os, ESerialDataFormat  DataFormat  )

sets up output file based on DataFormat in particular, initializes xml stream appropriately

Parameters
os output stream DataFormat format of file type
Returns
output stream

Definition at line 302 of file msmerge.cpp.

References eSerial_Xml, CObjectOStreamXml::SetReferenceSchema(), and CObjectOStream::SetWriteNamedIntegersByValue().

Referenced by COMSSAMerge::Run().

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