RetroSearch Browse

Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/molecule_8hpp_source.html below:

NCBI C++ ToolKit: src/app/cn3d/molecule.hpp Source File

34 #ifndef CN3D_MOLECULE__HPP 35 #define CN3D_MOLECULE__HPP 69 const

ncbi::objects::CMolecule_graph& graph,

75

eDNA = ncbi::objects::CBiomol_descr::eMolecule_type_dna,

76 eRNA

= ncbi::objects::CBiomol_descr::eMolecule_type_rna,

77 eProtein

= ncbi::objects::CBiomol_descr::eMolecule_type_protein,

78

eBiopolymer = ncbi::objects::CBiomol_descr::eMolecule_type_other_biopolymer,

79

eSolvent = ncbi::objects::CBiomol_descr::eMolecule_type_solvent,

80

eNonpolymer = ncbi::objects::CBiomol_descr::eMolecule_type_other_nonpolymer,

81 eOther

= ncbi::objects::CBiomol_descr::eMolecule_type_other

119 bool IsHeterogen

(

void

)

const

{

return

(!IsProtein() && !IsNucleotide() && !IsSolvent()); }

121 unsigned int NResidues

(

void

)

const

{

return

residues.size(); }

124

ResidueMap::const_iterator

info

=residues.find(rID);

125 if

(

info

!= residues.end())

return

(*info).second->GetAtomInfo(aID);

132 Vector

GetResidueColor(

int

sequenceIndex)

const

;

136 int

GetAlphaCoords(

int

nResidues,

const int

*seqIndexes,

const Vector

* *coords)

const

;

141

{

return

(IsProtein() && residueSecondaryStructures[residueID - 1] == eHelix); }

143

{

return

(IsProtein() && residueSecondaryStructures[residueID - 1] == eStrand); }

145

{

return

(!IsProtein() || residueSecondaryStructures[residueID - 1] == eCoil); }

149

{

return

residueDomains[residueID - 1]; }

152 bool

DrawAllWithTerminiLabels(

const AtomSet

*atomSet =

NULL

)

const

;

User-defined methods of the data storage class.

static const CBiostruc_residue_graph_set * standardDictionary

bool IsResidueInHelix(int residueID) const

std::vector< int > residueDomains

std::map< int, const Residue * > ResidueMap

int ResidueDomainID(int residueID) const

DisulfideMap disulfideMap

bool IsNucleotide(void) const

bool IsBiopolymer(void) const

const Residue::AtomInfo * GetAtomInfo(int rID, int aID) const

DisplayListList displayLists

bool IsResidueInCoil(int residueID) const

std::list< const Bond * > BondList

std::vector< eSecStruc > residueSecondaryStructures

static const int NO_DOMAIN_SET

bool IsHeterogen(void) const

const MoleculeIdentifier * identifier

std::list< unsigned int > DisplayListList

BondList interResidueBonds

const Sequence * sequence

std::map< int, int > DisulfideMap

bool IsResidueInStrand(int residueID) const

bool IsProtein(void) const

unsigned int NResidues(void) const

bool IsSolvent(void) const

#define ERR_POST(message)

Error posting with file, line number information but without error codes.

void Warning(CExceptionArgs_Base &args)

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_SCOPE(ns)

Define a new scope.

std::list< ncbi::CRef< ncbi::objects::CResidue_graph > > ResidueGraphList

Magic spell ;-) needed for some weird compilers... very empiric.

The NCBI C++/STL use hints.

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4