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NCBI C++ ToolKit: src/gui/widgets/edit/macro_parse_functions.cpp Source File

ostrm <<

<< f_args.

<< endl;

ostrm <<

<< f_args.

<< endl;

(

!= macro::CMacroRep::m_TopFuncName) {

do_tree = macro_rep.GetDoTree();

(

<<

);

vector<string> do_fncs;

arg_value = (*arg_it)->GetValue().GetStrValue();

pos = arg_value.find(

);

rt_var_name = arg_value.substr(0, pos);

(

<<

<< rt_var_name <<

<<

);

subtype = arg_value.substr(pos + 1,

);

(

& rt_var_name,

& subtype);

(subtype ==

&&

pos = field.find(

);

(args.size() == 3) {

((

==

&& args[1] ==

) ||

(

==

&& args[1] ==

) ||

(

==

&& (args[1] ==

|| args[1] ==

))) {

field = args[1] +

+ args[2];

(args.size() == 2) {

(

==

&& (args[1] ==

|| args[1] ==

)) {

(

!= macro::CMacroBioData::sm_StrComm)

node_type = node.

().GetType();

prefix_present =

;

suffix_present =

;

child_type = (*child_it)->GetValue().GetType();

(

str_it = (*child_it)->SubNodeBegin(); str_it != (*child_it)->SubNodeEnd(); ++str_it) {

subnode = (*str_it)->GetValue();

(subnode.GetStrValue(), macro::CMacroFunction_StringConstraints::sm_Equal)) {

arg_it = (*str_it)->SubNodeBegin();

first_arg = (*arg_it)->GetValue().GetStrValue();

second_arg = (*arg_it)->GetValue().GetStrValue();

pos = first_arg.find(

);

rt_var = first_arg.substr(0, pos);

prefix_present =

;

suffix_present =

;

field_value = second_arg;

(prefix_present && suffix_present) {

(!field_value.empty()) {

prefix_present =

;

suffix_present =

;

child = (*child_it)->GetValue();

(child.GetStrValue(), macro::CMacroFunction_StringConstraints::sm_Equal)) {

arg_it = (*child_it)->SubNodeBegin();

first_arg = (*arg_it)->GetValue().GetStrValue();

second_arg = (*arg_it)->GetValue().GetStrValue();

pos = first_arg.find(

);

rt_var = first_arg.substr(0, pos);

prefix_present =

;

suffix_present =

;

(prefix_present && suffix_present) {

first_arg = (*arg_it)->GetValue().GetStrValue();

second_arg = (*arg_it)->GetValue().GetStrValue();

pos = first_arg.find(

);

rt_var = first_arg.substr(0, pos);

(

!= macro::CMacroBioData::sm_DBLink)

node_type = node.

().GetType();

first_arg = (*arg_it)->GetValue().GetStrValue();

second_arg = (*arg_it)->GetValue().GetStrValue();

pos = first_arg.find(

);

rt_var = first_arg.substr(0, pos);

arg = (*node_it)->GetValue();

= arg.GetStrValue();

arg_node = (*from_it)->GetValue();

assign_fn.

.emplace_back(arg_node.GetOrig());

assign_fn.

= arg_node.GetStrValue();

(

fnc_arg_it = (*from_it)->SubNodeBegin(); fnc_arg_it != (*from_it)->SubNodeEnd(); ++fnc_arg_it) {

arg_value = (*fnc_arg_it)->GetValue();

assign_fn.

.emplace_back(arg_value.GetStrValue());

assign_fn = tmp_assignfn.front();

arg_node = (*node_it)->GetValue();

.m_FuncArgs.emplace_back(arg_node.GetStrValue());

do_tree = macro_rep.GetDoTree();

do_constraints.clear();

(

(fn_name, macro::CMacroFunction_GetSeqdesc::sm_BsrcForFeat) ||

(fn_name, macro::CMacroFunction_GetSeqdesc::sm_BsrcForMolinfo) ||

(fn_name, macro::CMacroFunction_GetSeqdesc::sm_BsrcForSeqdesc) ||

(fn_name, macro::CMacroFunction_GetSeqdesc::sm_MolinfoForBsrc) ||

(fn_name, macro::CMacroFunction_GetSeqdesc::sm_MolinfoForFeat) ||

macro::CMacroFunction_PubFields::s_IsPubFieldFnc(fn_name) ||

node_type = qnode.

();

left_arg = (*node_it)->GetValue();

(left_arg.GetStrValue(), macro::CMacroFunction_ChoiceType::GetFuncName())) {

first_arg = (*node_it)->SubNodeBegin();

(first_arg != (*node_it)->SubNodeEnd()) {

.m_FuncArgs.emplace_back((*first_arg)->GetValue().GetStrValue());

.m_FuncArgs.emplace_back((*node_it)->GetValue().GetStrValue());

.m_FuncArgs.emplace_back((*node_it)->GetValue().GetStrValue());

arg = (*node_it)->GetValue();

.m_FuncArgs.emplace_back(arg.GetStrValue());

first_arg = left_arg.GetStrValue();

(first_arg ==

) {

second_arg = (*node_it)->GetValue().GetStrValue();

.m_FuncArgs.emplace_back(second_arg);

(first_arg ==

) {

second_arg = (*node_it)->GetValue().GetStrValue();

.m_FuncArgs.emplace_back(second_arg);

(

== macro::CMacroBioData::sm_ImpFeat) {

(first_arg ==

) {

second_arg = (*node_it)->GetValue().GetStrValue();

.m_FuncArgs.emplace_back(second_arg);

(

== macro::CMacroBioData::sm_SeqFeat) {

(first_arg ==

) {

second_arg = (*node_it)->GetValue().GetStrValue();

.m_FuncArgs.emplace_back(second_arg);

.m_FuncArgs.emplace_back(

);

(

== macro::CMacroBioData::sm_UserObject) {

(first_arg ==

) {

second_arg = (*node_it)->GetValue().GetStrValue();

.m_FuncArgs.emplace_back(second_arg);

.m_FuncArgs.emplace_back(first_arg);

second_arg = (*node_it)->GetValue().GetStrValue();

.m_FuncArgs.emplace_back(second_arg);

arg = (*node_it)->GetValue();

.m_FuncArgs.emplace_back(arg.GetStrValue());

arg = (*node_it)->GetValue();

.m_FuncArgs.emplace_back(arg.GetStrValue());

arg = (*node_it)->GetValue();

.m_FuncArgs.emplace_back(arg.GetStrValue());

where_tree = macro_rep.GetWhereClause();

(

& func_it : func_list) {

(

& arg_it : func_it.m_FuncArgs) {

(arg_it.find(

) !=

) {

vector<string> tokens;

(

& token_it : tokens) {

var = macro_rep.GetVar(token_it);

token_it = var->GetGUIResolvedValue();

var = macro_rep.GetVar(arg_it);

arg_it = var->GetGUIResolvedValue();

CAssignQueryTreeGetArgs(SMacroFuncWithArgs &assign_fn, const string &target, TMacroFuncList &constraints, const string &rt_var)

bool x_GetFieldForSubname(string &field)

ETreeTraverseCode operator()(const CTreeNode< CQueryParseNode > &node, int delta)

bool x_IsStructCommField(const CTreeNode< CQueryParseNode > &node)

TMacroFuncList * m_Constraints

SMacroFuncWithArgs * m_AssignFnc

bool x_SubtypeIsOk(const string &rt_var_name, const string &subtype)

bool x_IsDBLinkField(const CTreeNode< CQueryParseNode > &node)

void x_ProcessFunction(const CTreeNode< CQueryParseNode > &node, const CTreeNode< CQueryParseNode > &parent_node, SMacroFuncWithArgs &func_info)

Functor should have the next prototype: ETreeTraverseCode Func(TreeNode& node, int delta_level) where...

CDoQueryTreeGetArgs(TMacroFuncList &func_list, TMacroFuncList &do_constraints, const macro::CMacroRep &macro_rep)

TMacroFuncList * m_Constraints

const macro::CMacroRep * m_MacroRep

TMacroFuncList * m_Functions

ETreeTraverseCode operator()(const CTreeNode< CQueryParseNode > &node, int delta)

vector< CQueryParseTree * > m_AssignQueries

Query tree and associated utility methods.

CQueryTreeListFunctions(vector< string > &functions)

ETreeTraverseCode operator()(const CTreeNode< CQueryParseNode > &node)

vector< string > * m_Functions

definition of a Culling tree

CWhereQueryTreeGetArgs(TMacroFuncList &func_list, const string &target)

void x_ProcessFunction(const CTreeNode< CQueryParseNode > &node, const CTreeNode< CQueryParseNode > &parent_node, SMacroFuncWithArgs &func_info)

ETreeTraverseCode operator()(const CTreeNode< CQueryParseNode > &node, int delta)

bool s_RefersToField(const string &fn_name) const

TMacroFuncList * m_Functions

#define LOG_POST(message)

This macro is deprecated and it's strongly recomended to move in all projects (except tests) to macro...

void Error(CExceptionArgs_Base &args)

#define NCBI_THROW(exception_class, err_code, message)

Generic macro to throw an exception, given the exception class, error code and message string.

const char * kStrCommFieldValue

const char * kStrCommFieldName

const char * kStrCommDbname

void Reset(void)

Reset reference object.

TObjectType & GetObject(void)

Get object.

const TNode * GetQueryTree() const

const string & GetStrValue() const

@ eIntConst

Integer const.

@ eBoolConst

Boolean (TRUE or FALSE)

@ eString

String ("free text")

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

IO_PREFIX::ostream CNcbiOstream

Portable alias for ostream.

static list< string > & Split(const CTempString str, const CTempString delim, list< string > &arr, TSplitFlags flags=0, vector< SIZE_TYPE > *token_pos=NULL)

Split a string using specified delimiters.

static const string BoolToString(bool value)

Convert bool to string.

static string Join(const TContainer &arr, const CTempString &delim)

Join strings using the specified delimiter.

static bool StartsWith(const CTempString str, const CTempString start, ECase use_case=eCase)

Check if a string starts with a specified prefix value.

static bool EqualNocase(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2)

Case-insensitive equality of a substring with another string.

Fun TreeBreadthFirstTraverse(TTreeNode &tree_node, Fun func)

Breadth-first tree traversal algorithm.

Fun TreeDepthFirstTraverse(TTreeNode &tree_node, Fun func)

Depth-first tree traversal algorithm.

ETreeTraverseCode

Tree traverse code returned by the traverse predicate function.

unsigned int CountNodes(unsigned int depth=1, TCountNodes how=0) const

Count nodes of the tree of which this node is a root.

TNodeList_CI SubNodeBegin(void) const

Return first const iterator on subnode list.

TNodeList_CI SubNodeEnd(void) const

Return last const iterator on subnode list.

const TValue & GetValue(void) const

Return node's value.

const TTreeType * GetParent(void) const

Get node's parent.

@ eTreeTraverseStop

Stop traversal (return form algorithm)

@ eTreeTraverse

Keep traversal.

@ eTreeTraverseStepOver

Do not traverse current node (pick the next one)

CNcbiOstream & operator<<(CNcbiOstream &ostrm, const SMacroFuncWithArgs &f_args)

vector< SMacroFuncWithArgs > TMacroFuncList

const string kPlaceHolderFn

Temporary function name to return the relevant information from the Where clause.

TMacroFuncList GetWhereFunctionsWithArgs(const macro::CMacroRep &macro_rep)

Returns the list of WHERE functions and their arguments as they appear in the macro.

const string kncRNAclassFn

void LookupFncArguments(const macro::CMacroRep &macro_rep, TMacroFuncList &func_list)

Looks up variables names used as function arguments and substitutes their name with their values.

const string kComparisonOp

vector< string > GetDoFunctions(const macro::CMacroRep &macro_rep)

Returns the list of do-functions present in the DO clause of the macro - includes multiples.

TMacroFuncList GetDoFunctionsWithArgs(const macro::CMacroRep &macro_rep, TMacroFuncList &do_constraints)

Returns the list of DO functions and their arguments as they appear in the macro.

const GenericPointer< typename T::ValueType > T2 value

Int4 delta(size_t dimension_, const Int4 *score_)

void copy(Njn::Matrix< S > *matrix_, const Njn::Matrix< T > &matrix0_)

Structure to store parsed function name and its arguments - as it appears in the macro It is used whe...

bool operator==(const SMacroFuncWithArgs &) const

CRef< SMacroFuncWithArgs > m_ChildFnc

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