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NCBI C++ ToolKit: include/gui/objutils/macro_fn_lookup.hpp Source File

1 #ifndef GUI_OBJUTILS___MACRO_FN_LOOKUP__HPP 2 #define GUI_OBJUTILS___MACRO_FN_LOOKUP__HPP 55

: m_Bsrc(0), m_ConvertNote(

false

), m_RemoveNote_Sp(

false

), m_RemoveNote_Univ(

false

) {}

59

m_ConvertNote(

false

),

60

m_RemoveNote_Sp(

false

),

61

m_RemoveNote_Univ(

false

) {}

65  void SetBioSource

(

const

objects::CBioSource& bsrc) { m_Bsrc.Reset(&bsrc); }

66  string

GetSuggestedCorrection(

void

);

68  void

CorrectBioSource(objects::CBioSource& bsrc,

bool

& converted_note,

bool

& removed_note_sp,

bool

& removed_note_univ);

70  static string

s_MakeUnculturedName(

const string

& taxname,

const string

& suffix =

kEmptyStr

);

76  static void

s_AddEnvironmentalSample(objects::CBioSource& bsrc);

77  static bool

s_OkToTaxFix(

const string

& taxname);

78  static bool

s_IsUnculturedName(

const string

& taxname);

79  static bool

s_HasTaxId(

const

objects::CBioSource& bsrc);

82  bool

x_ShouldLookupTaxname(

void

);

84  string

x_GetCorrection();

85  string

x_StandardFixes();

87  bool

x_CheckSuggestedFix(

string

& suggestion);

89  void

x_ConvertNote(objects::CBioSource& biosource,

const char

* note_list[],

const string

& new_note);

118  void SetBioSource

(

const

objects::CBioSource& bsrc) { m_Bsrc.Reset(&bsrc); }

120  void

CorrectBioSource(objects::CBioSource& bsrc,

bool

& remove_note);

125  bool

x_RemoveIfFoundSubSourceNote(objects::CBioSource &bsrc,

const char

* note_list[]);

126  bool

x_RemoveIfFoundOrgModNote(objects::CBioSource &bsrc,

const char

* note_list[]);

User-defined methods of the data storage class.

Include a standard set of the NCBI C++ Toolkit most basic headers.

DECLARE_FUNC_CLASS_WITH_FNCNAME(CMacroFunction_SetPubAuthorMI)

bool m_RemoveNote_Sp

flag to remove species-specific note

CUnculturedTool(const objects::CBioSource &bsrc)

CCulturedTool(const objects::CBioSource &bsrc)

bool m_RemoveNote_Univ

flag to remove universal note

bool m_ConvertNote

flag to convert species-specific note

CUnculturedTool(const CUnculturedTool &)

CUnculturedTool & operator=(const CUnculturedTool &)

void SetBioSource(const objects::CBioSource &bsrc)

CConstRef< objects::CBioSource > m_Bsrc

CConstRef< objects::CBioSource > m_Bsrc

void SetBioSource(const objects::CBioSource &bsrc)

CCulturedTool(const CCulturedTool &)

map< string, CRef< objects::CT3Reply > > m_ReplyCache

CCulturedTool & operator=(const CCulturedTool &)

CConstRef< C > ConstRef(const C *object)

Template function for conversion of const object pointer to CConstRef.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

#define NCBI_GUIOBJUTILS_EXPORT

Defines to provide correct exporting from DLLs in Windows.

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