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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/macro__engine_8hpp_source.html below:

NCBI C++ ToolKit: include/gui/objutils/macro_engine.hpp Source File

1 #ifndef GUI_OBJUTILS___MACRO_ENGINE__HPP 2 #define GUI_OBJUTILS___MACRO_ENGINE__HPP 68  const string

&

GetName

()

const

{

return

m_MacroName; }

69  string GetLog

()

const

{

return

m_Log; }

76

m_MacroName.assign(name);

81  if

(!m_MacroName.empty()) {

88  if

(!m_MacroName.empty()){

95  if

(!errmsg.empty()) {

96  if

(!m_ErrorLog.empty()) {

107

m_MacroName.resize(0);

109

m_ErrorLog.resize(0);

124  void

AddToReport(

const string

& report);

127  void

AddToErrorReport(

const string

&

error

);

131  void

GatherUnMatchedTableEntries(

const string

& report,

const int count

);

136  void

AddDataChanged(

bool

change);

138  void

AddFunctionName(

const string

& func_name);

145  void

LogStart(

const string

& macro_name);

155  void

LogStop(

bool

status,

const string

& err_message);

169  size_t

m_counter{ 0 };

172  bool

m_DataUpdated{

false

};

252

m_HugeFileMode(

false

),

253

m_ErrorMessage(

"Not executed"

),

255

m_Column(0) { x_InitSetOfBuiltInFunctions(lookup_synfile); }

259

m_HugeFileMode(huge_file_mode),

260

m_ErrorMessage(

"Not executed"

),

262

m_Column(0) { x_InitSetOfBuiltInFunctions(lookup_synfile); }

281  bool

ReadAndParseMacros(

const string

& filename, vector<

CRef<CMacroRep>

>& macro_list);

284 

vector<string> GetSynonymFilenames(

const

vector<

CRef<CMacroRep>

>& macro_list)

const

;

288  CMacroRep

* Parse(

const string

& macro_text);

324  virtual bool

ExistRTVar(

const string

& name);

328  virtual void

AddTmpRTVarObject(

const string

& name,

CObjectInfo

& oi);

329  virtual bool

GetTmpRTVarObject(

const string

& name,

CObjectInfo

& oi);

330  virtual void

ResetTmpRTVarObjects();

332  void SetRemoteUpdater

(

const

shared_ptr<objects::edit::CRemoteUpdater>& updater) { m_RemoteUpdater = updater; }

333  void SetDOIUpdater

(

const

shared_ptr<CDoiLookupWithCache>& updater) { m_DOIUpdater = updater; }

334  void SetISOJTAUpdater

(

const

shared_ptr<CISOJTALookupWithCache>& updater) { m_ISOJTAUpdater = updater; }

354  void

x_ResetStatus(

void

);

357  void

x_InitSetOfBuiltInFunctions(

bool

lookup_synfile);

360  void

x_InitStringConstraints(

bool

lookup_synfile);

385  bool operator()

(

const string

& str1,

const string

& str2)

const

Subclass of the IQueryParseUserObject which is held as the user-defined object in each CQueryParseNod...

The following asn-selectors are defined to be used in the FOR EACH statement:

Class provides macro language interface for bulk bio-editing.

Class for parsed macro representation.

CMacroStat - collecting statistics about a single macro.

Query tree and associated utility methods.

definition of a Culling tree

Base class for any user function that performs editing operations on ASN.1 data.

Interface class for resolving entities during function execution.

static const char * column

vector< CRef< CMacroRep > > TMacroLibrary

Uint4 GetErrorLine() const

Get error location in case previous command was unsuccessful.

CMacroStat & operator=(const CMacroStat &)

void SetName(const string &name)

shared_ptr< CISOJTALookupWithCache > m_ISOJTAUpdater

virtual bool Exec(const CMacroRep &macro_rep, const CMacroBioData &data, CRef< CMacroCmdComposite > CmdComposite, bool throw_on_error=false, CNcbiOstream *ostream=nullptr)=0

Executes a macro.

CIRef< IMacroBioDataIter > m_DataIter

const set< string > & GetDOFunctionNames() const

const string & GetErrorLog() const

bool m_Status

execution status of most recent command

bool GetStatus() const

Get status of most recent command.

void SetRemoteUpdater(const shared_ptr< objects::edit::CRemoteUpdater > &updater)

long GetExecutionTime() const

bool HasDataUpdated() const

virtual bool ReadAndParseMacros(const string &filename, vector< CRef< CMacroRep >> &macro_list)=0

Parses a file containing macros and stores them in a list.

void AppendError(const string &errmsg)

shared_ptr< objects::edit::CRemoteUpdater > m_RemoteUpdater

void SetISOJTAUpdater(const shared_ptr< CISOJTALookupWithCache > &updater)

string m_ErrorLog

Logging errors encountered during macro execution.

string m_ErrorMessage

error message

TBuiltInFunctionsMap m_BuiltInFunctions

Do section functions.

const string & GetName() const

shared_ptr< CHugeMacroContext > m_MacroContext

CRef< CMacroCmdComposite > m_CmdComposite

const CMacroRep * m_MacroRep

temporary data available while Exec is working. It is used by resolver.

virtual bool AppendToLibrary(const string &filename, CMacroLib::TMacroLibrary &lib)=0

Parses a file containing macros and appends the results to a map.

vector< CRef< IFunctionLog > > m_FunctionsLog

void BuildReport(const string &rep)

map< string, IEditMacroFunction *, SKey_Less > TBuiltInFunctionsMap

map< string, CRef< CMQueryNodeValue > > TRTVarsMap

Uint4 GetErrorColumn() const

CMacroStat(const CMacroStat &)

virtual const CMacroStat & GetStatistics() const =0

Gets the most recently executed macro statistics.

shared_ptr< CDoiLookupWithCache > m_DOIUpdater

map< string, CObjectInfo > TTempRTVarsMap

const vector< CRef< IFunctionLog > > & GetFunctionsLog() const

CMacroEngine(bool huge_file_mode, bool lookup_synfile=false)

bool operator()(const string &str1, const string &str2) const

void SetHugeContext(const shared_ptr< CHugeMacroContext > &context)

const CMacroStat & GetStatistics() const

Gets the most recently executed macro statistics.

string m_Log

Logging all activities during this macro.

TTempRTVarsMap m_TempRTVars

const vector< pair< string, int > > & GetUnmatchedTableEntries() const

size_t GetCounter() const

CMacroEngine(bool lookup_synfile=false)

Constructor.

bool m_EvalDo

Flag indicates if the work should be performed on the Do clause.

const CMacroLog & GetMacroReport() const

vector< pair< string, int > > m_UnmatchedList

void ClearAndBuildReport(const string &rep)

virtual CMacroRep * Parse(const string &macro_text)=0

Parses macro script into its binary representation.

const string & GetErrorMessage() const

Get error message in case previous command was unsuccessful.

bool m_HugeFileMode

execution will take place in 'huge file mode'

set< string > m_FuncNames

string m_MacroName

name of macro

void SetDOIUpdater(const shared_ptr< CDoiLookupWithCache > &updater)

CMacroStat m_MacroStat

Most recent executed macro statistics.

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

IO_PREFIX::ostream CNcbiOstream

Portable alias for ostream.

static int CompareNocase(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2)

Case-insensitive compare of a substring with another string.

#define NCBI_GUIOBJUTILS_EXPORT

Defines to provide correct exporting from DLLs in Windows.

Macro library for storing parsed macros.

static CS_CONTEXT * context


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