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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/location__panel_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/widgets/edit/location_panel.cpp Source File

packed_seqint.

().push_back(interval);

packed_seqint.

().push_back(

);

packed_seqint.

().push_back(interval);

loc.

().SetId(*new_id);

loc.

().SetFrom(0);

wxWindowID

,

wxPoint& pos,

wxSize&

,

style )

: m_Object(&object), m_ToEdit(new

()), m_AllowNuc(allow_nuc), m_AllowProt(allow_prot), m_is_cds(is_cds)

Create(parent,

, pos,

, style);

wxWindowID

,

wxPoint& pos,

wxSize&

,

style )

: m_Object(&object), m_ToEdit(new

()), m_AllowNuc(allow_nuc), m_AllowProt(allow_prot), m_is_cds(is_cds)

Create(parent,

, pos,

, style);

(loc.

()) {

SetExtraStyle(wxWS_EX_VALIDATE_RECURSIVELY);

wxPanel::Create( parent,

, pos,

, style );

GetSizer()->SetSizeHints(

);

should_be_null =

;

((*it)->IsNull()) {

(should_be_null) {

should_be_null =

;

(should_be_null) {

should_be_null =

;

(!should_be_null) {

wxBoxSizer* itemBoxSizer2 =

wxBoxSizer(wxVERTICAL);

itemPanel1->SetSizer(itemBoxSizer2);

wxBoxSizer* itemBoxSizer3 =

wxBoxSizer(wxHORIZONTAL);

itemBoxSizer2->Add(itemBoxSizer3, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

bsh =

->GetBioseqHandle(loc);

(bsh && bsh.

()) {

=

wxCheckBox( itemPanel1,

,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer2->Add(

, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

from = (**it).GetFrom();

((**it).IsSetId()) {

((**it).IsSetStrand())

strand = (**it).GetStrand();

((**it).IsSetFuzz_from() && (**it).GetFuzz_from().IsLim())

((**it).IsSetFuzz_to() && (**it).GetFuzz_to().IsLim())

(fuzz && from == to)

(!wxPanel::TransferDataToWindow())

(!wxPanel::TransferDataFromWindow())

static CRef< CScope > m_Scope

@ eExtreme_Biological

5' and 3'

void SetLocType(int value)

CRef< objects::CSeq_loc > GetSeq_loc()

void AddRow(int from, int to, int strand, const wxString &seqID, const bool fuzz)

void SetPartials(bool partial5, bool partial3)

wxString GetListIdStrForSeqId(const objects::CSeq_id &seq_id)

virtual bool IsExportEnabled(void)

void x_LoadSeqLoc(const objects::CSeq_loc &loc)

void Init()

Initialises member variables.

void SetSeq_loc(CSerialObject &object)

virtual bool TransferDataFromWindow()

virtual bool IsImportEnabled(void)

bool Create(wxWindow *parent, wxWindowID id=ID_CLOCATIONPANEL, const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxDefaultSize, long style=wxTAB_TRAVERSAL)

Creation.

static bool ShowToolTips()

Should we show tooltips?

CRef< objects::CSeq_loc > GetSeq_loc() const

wxIcon GetIconResource(const wxString &name)

Retrieves icon resources.

void CreateControls()

Creates the controls and sizers.

CRef< objects::CScope > m_Scope

virtual CRef< CSerialObject > OnExport(void)

CLocationPanel()

Constructors.

wxBitmap GetBitmapResource(const wxString &name)

Retrieves bitmap resources.

~CLocationPanel()

Destructor.

CLocationListCtrl * m_LocationCtrl

CRef< objects::CPacked_seqint > m_ToEdit

virtual bool TransferDataToWindow()

virtual void OnImport(CNcbiIfstream &istr)

wxCheckBox * m_UpdatemRNASpan

Base class for all object manager exceptions.

Base class for all serializable objects.

unsigned int TSeqPos

Type for sequence locations and lengths.

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Set object to copy of another one.

#define MSerial_AsnText

I/O stream manipulators –.

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Optimized implementation of CSerialObject::Assign, which is not so efficient.

CBioseq_Handle GetBioseqHandle(const CSeq_id &id)

Get bioseq handle by seq-id.

TInst_Length GetInst_Length(void) const

void Reset(void)

Reset handle and make it not to point to any bioseq.

void Reset(void)

Reset reference object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

IO_PREFIX::ifstream CNcbiIfstream

Portable alias for ifstream.

@ eLim_tr

space to right of position

bool IsSetId(void) const

WARNING: this used to be optional Check if a value has been assigned to Id data member.

bool IsMix(void) const

Check if variant Mix is selected.

list< CRef< CSeq_interval > > Tdata

ENa_strand

strand of nucleic acid

const Tdata & Get(void) const

Get the member data.

Tdata & Set(void)

Assign a value to data member.

const TPnt & GetPnt(void) const

Get the variant data.

TPoint GetPoint(void) const

Get the Point member data.

const TWhole & GetWhole(void) const

Get the variant data.

bool IsSetFuzz(void) const

Check if a value has been assigned to Fuzz data member.

list< CRef< CSeq_loc > > Tdata

const TFuzz & GetFuzz(void) const

Get the Fuzz member data.

E_Choice Which(void) const

Which variant is currently selected.

const TId & GetId(void) const

Get the Id member data.

TStrand GetStrand(void) const

Get the Strand member data.

const Tdata & Get(void) const

Get the member data.

void SetFuzz_from(TFuzz_from &value)

Assign a value to Fuzz_from data member.

bool IsSetStrand(void) const

Check if a value has been assigned to Strand data member.

bool IsWhole(void) const

Check if variant Whole is selected.

const TInt & GetInt(void) const

Get the variant data.

void SetStrand(TStrand value)

Assign a value to Strand data member.

E_Choice

Choice variants.

const TMix & GetMix(void) const

Get the variant data.

const TPacked_int & GetPacked_int(void) const

Get the variant data.

@ e_not_set

No variant selected.

static void s_Load_Seq_point(CPacked_seqint &packed_seqint, const CSeq_point &src)

static void s_Load_Seq_interval(CPacked_seqint &packed_seqint, const CSeq_interval &src)

bool s_IsOrdered(const CSeq_loc &loc)

static void s_ConvertWholeToInt(CSeq_loc &loc, CRef< CScope > scope)

static void s_Load_Packed_seqint(CPacked_seqint &packed_seqint, const CPacked_seqint &src)

const struct ncbi::grid::netcache::search::fields::SIZE size

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