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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/line__error_8hpp_source.html below:

NCBI C++ ToolKit: include/objtools/readers/line_error.hpp Source File

eProblem_GeneralParsingError

&

(

)

= 0;

(

)

= 0;

Message()

;

SeverityStr()

;

& ErrorMessage()

;

ProblemStr()

;

ProblemStr(

eProblem);

(

)

{

Message(); }

(

)

{

0; }

& strFeatureName =

(

),

& strQualifierName =

(

),

& strQualifierValue =

(

),

& strErrorMessage =

(

),

NCBI_NORETURN

Throw(

)

;

uLine) { m_uLine = uLine; };

& errorMessage)

m_strErrorMessage = errorMessage;

m_vecOfOtherLines.push_back(uOtherLine);

(

)

{

m_strSeqId; }

(

)

{

m_uLine; }

& strErrorMessage =

(

),

& strFeatureName =

(

),

& strQualifierName =

(

),

& strQualifierValue =

(

),

NCBI_NORETURN

Throw(

)

;

uLine) { m_uLine = uLine; };

m_vecOfOtherLines.push_back(uOtherLine);

(

)

{

m_eProblem; }

(

)

{

m_eSeverity; }

(

)

{

m_strSeqId; }

(

)

{

m_uLine; }

(

)

{

m_vecOfOtherLines; }

(

)

(

)

{

m_Code; };

(

)

{

m_Subcode; }

eProblem = eProblem_GeneralParsingError,

& strFeatureName =

(

),

& strQualifierName =

(

),

& strQualifierValue =

(

),

NCBI_NORETURN

Throw(

)

;

(

)this->x_GetErrCode();

(

)

{

m_uLineNumber; }

uLineNumber) { m_uLineNumber = uLineNumber; }

m_vecOfOtherLines.push_back(uOtherLine);

eProblem = eProblem_GeneralParsingError,

& strFeatureName =

(

),

& strQualifierName =

(

),

& strQualifierValue =

(

),

const std::string & SeqId(void) const override

std::string m_strFeatureName

void PatchLineNumber(unsigned int uLine)

const std::string & QualifierName(void) const override

const std::string & QualifierValue(void) const override

const TVecOfLines & OtherLines(void) const override

virtual ~CLineErrorEx(void)

EProblem Problem(void) const override

virtual EDiagSev Severity(void) const override

virtual int GetSubCode(void) const override

TVecOfLines m_vecOfOtherLines

virtual int GetCode(void) const override

std::string m_strErrorMessage

unsigned int Line(void) const override

void AddOtherLine(unsigned int uOtherLine)

virtual string Message(void) const override

std::string m_strQualifierValue

virtual std::string ProblemStr(void) const override

std::string m_strQualifierName

const std::string & ErrorMessage(void) const override

const std::string & FeatureName(void) const override

const std::string & ErrorMessage(void) const

void PatchErrorMessage(const string &errorMessage)

const std::string & QualifierName(void) const

EProblem Problem(void) const

const TVecOfLines & OtherLines(void) const

std::string m_strQualifierName

const std::string & SeqId(void) const

void AddOtherLine(unsigned int uOtherLine)

const std::string & FeatureName(void) const

virtual EDiagSev Severity(void) const

unsigned int Line(void) const

std::string m_strErrorMessage

virtual ~CLineError(void) noexcept

std::string m_strQualifierValue

void PatchLineNumber(unsigned int uLine)

virtual std::string ProblemStr(void) const

std::string m_strFeatureName

const std::string & QualifierValue(void) const

TVecOfLines m_vecOfOtherLines

EProblem Problem(void) const

std::string m_strQualifierName

void SetLineNumber(unsigned int uLineNumber)

const std::string & SeqId(void) const

TErrCode GetErrCode(void) const

const std::string & QualifierName(void) const

unsigned int Line(void) const

void AddOtherLine(unsigned int uOtherLine)

const std::string & QualifierValue(void) const

EDiagSev Severity(void) const

std::string m_strFeatureName

const std::string & ErrorMessage(void) const

~CObjReaderLineException(void) noexcept

std::string m_strQualifierValue

std::string m_strErrorMessage

const std::string & FeatureName(void) const

TVecOfLines m_vecOfOtherLines

std::string Message() const

unsigned int m_uLineNumber

const TVecOfLines & OtherLines(void) const

CRef< CSerialObject > m_pObject

virtual ILineError * Clone(void) const =0

This is here because the copy constructor may be protected eventually.

virtual const string & QualifierName(void) const =0

virtual void DumpAsXML(CNcbiOstream &out) const

virtual string GetText(void) const

virtual void Dump(CNcbiOstream &out) const

virtual EDiagSev Severity(void) const

virtual string Message() const

@ eProblem_InvalidQualifier

@ eProblem_QualifierBadValue

@ eProblem_NumericQualifierValueIsNotANumber

@ eProblem_InternalPartialsInFeatLocation

@ eProblem_InvalidResidue

@ eProblem_FeatMustBeInXrefdGene

@ eProblem_IgnoredResidue

@ eProblem_CreatedGeneFromMultipleFeats

@ eProblem_UnrecognizedFeatureName

@ eProblem_ParsingModifiers

@ eProblem_MissingContext

@ eProblem_UnexpectedAminoAcids

@ eProblem_FeatureNameNotAllowed

@ eProblem_IncompleteFeature

@ eProblem_ModifierFoundButNoneExpected

@ eProblem_QualifierWithoutFeature

@ eProblem_UnexpectedNucResidues

@ eProblem_FeatureBadStartAndOrStop

@ eProblem_NumericQualifierValueHasExtraTrailingCharacters

@ eProblem_TooManyAmbiguousResidues

@ eProblem_UnrecognizedSquareBracketCommand

@ eProblem_UnrecognizedQualifierName

@ eProblem_BadFeatureInterval

@ eProblem_InconsistentQualifiers

@ eProblem_NonPositiveLength

@ eProblem_ContradictoryModifiers

@ eProblem_ExpectedModifierMissing

@ eProblem_InvalidLengthAutoCorrected

@ eProblem_GeneralParsingError

@ eProblem_DiscouragedFeatureName

@ eProblem_ExtraModifierFound

@ eProblem_NoFeatureProvidedOnIntervals

@ eProblem_DiscouragedQualifierName

virtual ~ILineError(void) noexcept

vector< unsigned int > TVecOfLines

virtual int GetCode(void) const

virtual int GetSubCode(void) const

virtual EProblem Problem(void) const =0

virtual string ProblemStr() const

virtual const string & SeqId(void) const =0

virtual unsigned int Line(void) const =0

virtual const TVecOfLines & OtherLines(void) const =0

virtual const string & QualifierValue(void) const =0

virtual const string & ErrorMessage() const

virtual std::string Compose(void) const

virtual const string & FeatureName(void) const =0

virtual EDiagSev GetSeverity(void) const

Include a standard set of the NCBI C++ Toolkit most basic headers.

std::ofstream out("events_result.xml")

main entry point for tests

EDiagSev

Severity level for the posted diagnostics.

@ eDiag_Error

Error message.

void Write(CObjectOStream &out, TConstObjectPtr object, const CTypeRef &type)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

IO_PREFIX::ostream CNcbiOstream

Portable alias for ostream.

#define NCBI_XOBJUTIL_EXPORT

constexpr bool empty(list< Ts... >) noexcept

Miscellaneous common-use basic types and functionality.

Portable reference counted smart and weak pointers using CWeakRef, CRef, CObject and CObjectEx.

static SLJIT_INLINE sljit_ins msg(sljit_gpr r, sljit_s32 d, sljit_gpr x, sljit_gpr b)

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