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NCBI C++ ToolKit: src/gui/widgets/seq_graphic/layout_track_impl.cpp Source File

60

, m_ShowFrame(

false

)

63

, m_Attrs(fDefaultAttr)

69

, m_ParentTrack(

NULL

)

74  "track_expand"

,

"track_collapse"

));

94  if

(settings.

empty

()) {

95

profile = profile_str;

98  if

(iter != settings.

end

()) {

99

profile = iter->second;

100

settings.

erase

(iter);

120  if

(settings.

empty

()) {

124  if

(iter != settings.

end

()) {

125

preset_style = iter->second;

168  bool

consumed =

false

;

176  if

(idx >= 0 &&

m_Icons

[idx].m_Enabled) {

191

rcm.

SetLeft

(center_x - half_size);

192

rcm.

SetRight

(center_x + half_size);

207  bool

consumed =

false

;

246  if

(pContainer ==

NULL

) {

252  if

((*iter)->GetTrack() ==

this

) {

254  for

(

auto

annot: annots) {

259  if

(!(*iter)->GetRemotePath().empty())

270  if

(pContainer ==

nullptr

)

275  for

(

const auto

& proxy : proxies) {

276  if

(proxy->GetTrack() !=

this

)

279  const auto

&path = proxy->GetRemotePath();

286  if

(host ==

"ftp.ncbi.nlm.nih.gov"

) {

310

(

TVPUnit

)tb_height + (tb_height > 0.0 ? 2 : 0));

315

p_areas->push_back(area);

316  return

&p_areas->back();

506

rect.

Offset

(off_x, 0.0);

507

gl.

Color4f

(0.6f, 0.6f, 0.9f, 0.4f);

546  int

icon_num =

static_cast<int>

(

m_Icons

.size());

547  for

(

int

idx = 0; idx < icon_num; ++idx) {

550

}

else if

(

config

->GetShowCommentBg()) {

573  if

(

config

->GetShowComments()) {

599

gl.

Color3f

(1.0f, 1.0f, 1.0f);

606

repeat_dist =

max

(repeat_dist, title_len);

609  if

(

config

->GetRepeatComment()) {

610

repeat_num = (

int

)ceil(

fabs

(rcm.

Width

() / repeat_dist));

614

title = com_font->

Truncate

(title, max_title_w);

619  for

(

int i

= 0;

i

< repeat_num; ++

i

) {

632  bool

lite_version)

const 640  TModelRect

rc_coord(0.0, 1.0, coord, 1.0 - coord);

645

gl.

Begin

(GL_LINES);

646

gl.

Color3f

(1.0f, 1.0f, 1.0f);

651

gl.

Color3f

(0.1f, 0.1f, 0.1f);

657

gl.

Color4f

(0.6f, 0.6f, 1.0f, 0.6f);

664  if

(lite_version && !

m_Icons

[idx].m_Icon1_lite.empty()) {

675

gl.

Enable

(GL_TEXTURE_2D);

715

TIcons::iterator iter =

m_Icons

.begin();

716  while

(iter !=

m_Icons

.end() && iter->m_Id != icon.

m_Id

) {

728

TIcons::iterator iter =

m_Icons

.begin();

729  while

(iter !=

m_Icons

.end() && iter->m_Id !=

id

) {

741

TIcons::iterator iter =

m_Icons

.begin();

742  while

(iter !=

m_Icons

.end() && iter->m_Id !=

id

) {

746

iter->m_Enabled = enabled;

754

TIcons::iterator iter =

m_Icons

.begin();

755  while

(iter !=

m_Icons

.end() && iter->m_Id !=

id

) {

759

iter->m_Shown = shown;

768  int

icon_num =

static_cast<int>

(

m_Icons

.size());

769  for

(

int

idx = 0; idx < icon_num; ++idx) {

819

size_y = min<int>(size_y, rcm.

Bottom

() - off_seq.

m_Y

);

820

off_seq.

m_X

= rcm.

Right

() - (idx * 3.0 + 2.0) * size_x;

822

rcm.

Init

(-size_x, size_y, size_x, -size_y);

826

off_seq = pane->

UnProject

(off_screen.

X

(), off_screen.

Y

());

827

rcm.

Offset

(off_seq.

X

(), off_seq.

Y

());

835

TIcons::const_iterator iter =

m_Icons

.begin();

837  while

(iter !=

m_Icons

.end() && iter->m_Id !=

id

) {

868  const string

& img_file)

881

tex->SetFilterMag(GL_NEAREST);

882

tex->SetFilterMin(GL_NEAREST);

883

tex->SetWrapS(GL_CLAMP);

884

tex->SetWrapT(GL_CLAMP);

885

tex->SetTexEnv(GL_REPLACE);

889  "cannot read image from file "

<< path.ToUTF8());

901  bool

need_reload =

false

;

903  if

( !iter->second )

return false

;

905  if

( !iter->second->IsValid() ) {

912

iter->second->Load();

922  const

vector<string>& target_annots,

923  const string

& annot_type,

924  const string

& track_type,

927  if

(target_annots.empty() && annot_type.empty() && track_type.empty()) {

931  string

track_type_l = track_type;

933  if

(target_annots.empty()) {

936  if

(

nullptr

== iter->second)

938  bool

matched = !annot_type.empty();

943  if

(matched && !track_type_l.empty() &&

944

iter->second->m_Subtypes.count(track_type_l) == 0) {

950

iter->second->m_Name, iter->second->m_Title));

955  ITERATE

(vector<string>, iter, target_annots) {

962  if

(s_iter == src_annots.

end

())

continue

;

964  if

(!annot_type.empty() && !s_iter->second->m_AnnotType.empty() &&

968  if

(!track_type_l.empty() && !s_iter->second->m_Subtypes.empty() &&

969

s_iter->second->m_Subtypes.count(track_type_l) == 0) {

973

s_iter->second->m_Name, s_iter->second->m_Title));

982  const string

& filter)

984  if

(filter.empty()) {

995  if

(pos != string::npos) {

996  return source

.substr(0, pos);

1005  if

(pos != string::npos) {

1013

vector<string> data_types{

"asn1"

,

"snp"

,

"vcf"

};

1014  _ASSERT

(data_type < data_types.size());

1015  return

data_types[data_type];

CGlAttrGuard - guard class for restoring OpenGL attributes.

string m_Descr

description that can be used as label or tooltip

@ fNoNavigation

track title won't show navigation controls

@ fNoPin

tooltip is not pinnable

@ fNoHighlight

no highlighting on mouse over

@ fNoSelection

the object can't be selected

int m_Flags

area flags, will need to replace m_Type

TTrackErrorStatus m_TrackErrorStatus

virtual void x_RenderProgressBar() const

Method for rendering the job loading or layout generating progress.

void SetTrackAttr(TTrackAttrFlags flags)

virtual int x_GetIconState(TIconID id) const

Get current status for a given button.

int m_IndentLevel

track hierachy indentation level.

void x_DeregisterIcon(TIconID id)

deregister an icon if already registered.

virtual void x_UpdateBoundingBox()

Update the bounding box assuming children's sizes are fixed if any.

virtual void GetTooltip(const TModelPoint &p, ITooltipFormatter &tt, string &t_title) const

Get the tooltip if available.

bool m_Expanded

is this track in expanded state

bool isRemotePath() const

virtual bool x_ShowTitle() const

Need to preserve title space and show the title.

int x_HitIconTest(const TModelPoint &p) const

hit any icon?.

virtual bool OnLeftDblClick(const TModelPoint &p)

@ eIcon_Expand

expand/collapse icon

virtual void x_RenderContent() const =0

The content rendering must be implemented in the derived layout tracks.

static bool InitIconTextures()

initialize OpenGL ttexture objects for icons.

virtual bool NeedTooltip(const TModelPoint &p, ITooltipFormatter &tt, string &t_title) const

Check if need to show tooltip.

ILayoutTrackHost * m_LTHost

Top level host owning the tracks.

virtual void x_Expand(bool expand)

Collapse or expand the track.

string m_Msg

special message need to show on title bar

string m_Title

track title

static CFastMutex sm_Mutex

mutex guarding the icon texture map

virtual void x_GetTBRect(TModelRect &rc) const

Get title bar rectange exclude top margin.

bool m_ShowFrame

need to draw frame, not title

virtual void x_SaveSettings(const string &preset_style)

save the track settings to a profile string.

virtual void x_LoadSettings(const string &preset_style, const TKeyValuePairs &settings)

load the track settings.

virtual bool OnLeftDown(const TModelPoint &p)

bool m_On

is this track shown

CLayoutTrack * GetParentTrack()

void x_EnableIcon(TIconID id, bool enabled)

Enable/disable an existing icon.

void CloseMe()

close this track.

void x_OnLayoutChanged()

update the layout.

TTrackAttrFlags m_Attrs

various track attributes

virtual void x_RenderIcon(TIconID id, bool highlighted, bool lite_version=false) const

Render track icons.

virtual string x_GetHistMsg() const

Histogram configuration (linear, log, etc) is also on the title bar but multiple track types can have...

virtual void x_OnIconClicked(TIconID id)

Mouse left-click event handler on an icon.

void SetShow(bool shown)

set the flag only.

TIcons m_Icons

registered icon info

virtual bool x_Empty() const =0

void LoadProfile(const string &profile_str)

set track profile and load settings.

@ fNavigable

Track has navigation controls.

@ fFrameVisible

track frame will be rendered when triggered.

@ fShowAlways

always be rendered even for an empty track.

@ fFullTrack

track occupying the full horizontal screen.

@ fShowIcons

Track has control icons at the bottom.

@ fCollapsible

can be collpased and expanded.

string TIconAlias

the icon alias used as a key

const string & GetProfile() const

virtual void x_RenderTitleBar() const

Method for rendering the track title bar.

bool x_HitTitleBar(const TModelPoint &p) const

hit the title bar?.

TModelUnit x_GetTBHeight() const

Get title bar height including margin.

TTrackErrorStatus m_ErrorStatus

int x_GetIconIdxById(TIconID id) const

get icon index in the registed icons using its id.

static void RegisterIconImage(const TIconAlias &key, const string &img_file)

register the image for an icon.

int m_HighlightedIcon

the highlighted icon index

CConstRef< CSeqGraphicConfig > x_GetGlobalConfig() const

Method for getting global configuration from rendering context.

void SetProfile(const string &preset_style)

CLayoutTrack inline method implmentation.

int m_Progress

any job progress index (0 - 100)

static TTexMap sm_IconMap

only intialized once app-wise

bool OnMotion(const TModelPoint &pt)

bool x_IsNCBITrack() const

Indicates whether the track is NCBI track.

CRef< CSeqGraphicConfig > m_gConfig

global configuration.

int TIconID

use int as TIconID instead of EIconID.

TModelRect x_GetIconRect(int idx) const

string m_Id

track identifier

CLayoutTrack(CRenderingContext *r_cntx)

bool m_isBlast

true if the track is known to be generated and uploaded by BLAST

virtual string GetFullTitle() const

get a more meaningful title.

virtual void x_Draw() const

The default renderer for this layout object.

void x_ShowIcon(TIconID id, bool shown)

Show/hide an existing icon.

virtual CHTMLActiveArea * InitHTMLActiveArea(TAreaVector *p_areas) const

Initialize the HTML active area for a track.

static void RegisterCommonIconImages()

register images for the common icons.

void x_RegisterIcon(const SIconInfo &icon)

register track icons.

void x_RenderFrame() const

Method for rendering the track frame including the icons.

void Post(CRequestStatus::ECode status=CRequestStatus::e200_Ok)

CRenderingContext offers the basic context and utility methods for rendering layout objects in featur...

void TextOut(const CGlTextureFont *font, const char *text, TModelUnit x, TModelUnit y, bool center, bool adjust_flip=true) const

CGlPane * GetGlPane()

inline method implementations

const TModelUnit & GetOffset() const

void DrawShadedQuad(const TModelRect &rcm, const CRgbaColor &c1, const CRgbaColor &c2, bool shade_vert=true) const

const TModelRange & GetVisibleRange() const

void DrawRect(const TModelRect &rc) const

void DrawQuad(const TModelRect &rc, bool border=false) const

bool IsSkipControls() const

TModelUnit SeqToScreen(const TModelUnit &size) const

convert from sequence positions to screen pixels

TModelUnit ScreenToSeq(const TModelUnit &size) const

convert from screen pixels to sequence positions

bool IsSkipContent() const

bool IsSkipTitleBar() const

void DrawTexture(const TModelRect &rc, const TModelRect &rc_coord) const

void AdjustToOrientation(TModelUnit &x) const

class CRgbaColor provides a simple abstraction for managing colors.

static void ParseProfileString(const string &profile_str, TKeyValuePairs &settings)

void x_InitHTMLActiveArea(CHTMLActiveArea &area) const

initialize the basic information for a given active area.

CRenderingContext * m_Context

the rendering context

virtual void x_OnLayoutChanged()

update the layout.

virtual void SetHeight(TModelUnit h)

virtual TModelUnit GetRight() const

static bool PointInRect(const TModelPoint &p, const TModelRect &rc)

virtual void SetWidth(TModelUnit w)

virtual void SetLeft(TModelUnit l)

virtual TModelUnit GetTop() const

virtual TModelUnit GetHeight() const

virtual void Update(bool)

Update content and layout including the bounding box.

bool x_Visible_V() const

is this glyph visible in vertical direction?

virtual TModelUnit GetLeft() const

vector< CHTMLActiveArea > TAreaVector

void x_World2Local(TModelPoint &p) const

Transform the coordiante from world coord. to local coord.

void SetRenderingContext(CRenderingContext *context)

Set the rendering context.

CRef< CGlTextureFont > GetCommentFont() const

const string & GetSizeLevel() const

bool AutoHideTrack() const

bool GetShowTrackMinusPlusSign() const

float GetCommentBottomMargin() const

bool GetShowMessage() const

float GetCommentTopMargin() const

static wxString ResolvePath(const wxString &path, const wxString &rel_name)

Utility function to hide the platform specifics of locating our standard directories and files.

CTrackContainer - a track container in the form of layout track.

const TTrackProxies & GetSubtrackProxies() const

CTrackContainer inline methods.

CTempTrackProxy::TTrackProxies TTrackProxies

static string DataTypeToString(EDataType data_type)

static string ExtractFilterName(const string &source)

extract filter name from a source string.

static string ExtractAnnotName(const string &source)

extract anntation name from a source string.

static string MergeAnnotAndFilter(const string &annot, const string &filter)

create a new name based on annotation name and fitler string.

static void GetMatchedAnnots(const TAnnotMetaDataList &src_annots, const vector< string > &target_annots, const string &annot_type, const string &track_type, TAnnotNameTitleMap &out_annots)

Help function to find matched annotations.

virtual void LTH_OnLayoutChanged()=0

provides mouse coords in OpenGL viewport coord system

ITrackContainer The interface for layout track that is also a container of tracks.

virtual void CloseTrack(int order)=0

Close a track.

container_type::const_iterator const_iterator

container_type::iterator iterator

const_iterator end() const

iterator_bool insert(const value_type &val)

container_type::value_type value_type

const_iterator find(const key_type &key) const

iterator_bool insert(const value_type &val)

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define NON_CONST_ITERATE(Type, Var, Cont)

Non constant version of ITERATE macro.

#define LOG_POST(message)

This macro is deprecated and it's strongly recomended to move in all projects (except tests) to macro...

void Error(CExceptionArgs_Base &args)

static bool IsNAA(const string &annot, bool isStrict=false)

check if a given annotation is a named annotation accession[.version][number] when isSctrict == false...

static bool isRmtAnnotName(const string &sAnnotname)

check if a given annotation was created by a remote file pipeline

static CGlResMgr & Instance()

virtual void Translatef(GLfloat x, GLfloat y, GLfloat z)=0

virtual void Enable(GLenum glstate)=0

virtual void Begin(GLenum mode)=0

Start rendering.

virtual void BeginClippingRect(GLint x, GLint y, GLsizei width, GLsizei height)=0

void Color3f(GLfloat r, GLfloat g, GLfloat b)

TModelPoint UnProject(TVPUnit m_x, TVPUnit m_y) const

void Offset(T d_x, T d_y)

IRender & GetGl()

convenience function for getting current render manager

void Vertex2d(GLdouble x, GLdouble y)

TVPRect & GetViewport(void)

virtual TModelUnit TextHeight(const CGlTextureFont *font) const =0

virtual TModelUnit TextWidth(const CGlTextureFont *font, const char *text) const =0

virtual void PopMatrix()=0

CGlPoint< T > CenterPoint() const

virtual void EndClippingRect()=0

virtual bool IsPrinterFriendly() const =0

virtual void End()=0

Finish rendering (create buffer and send to renderer)

void Color4f(GLfloat r, GLfloat g, GLfloat b, GLfloat a)

virtual void Disable(GLenum glstate)=0

glDisable()

virtual void ColorC(const CRgbaColor &c)=0

Set current color (glColor{3,4}{f,d}{v,})

virtual void PushMatrix()=0

string Truncate(const char *text, TModelUnit w, ETruncate trunc=eTruncate_Ellipsis) const

Truncate text to the secified width.

TVPPoint Project(TModelUnit m_x, TModelUnit m_y) const

virtual void AddRow(const string &sContents="", unsigned colspan=2)=0

add a row with a cell, spanning across all columns

virtual bool IsEmpty() const =0

Indicates if the tooltip is empty.

void Reset(void)

Reset reference object.

position_type GetLength(void) const

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

IO_PREFIX::ifstream CNcbiIfstream

Portable alias for ifstream.

static string Int8ToString(Int8 value, TNumToStringFlags flags=0, int base=10)

Convert Int8 to string.

static bool EqualNocase(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2)

Case-insensitive equality of a substring with another string.

static string & ToLower(string &str)

Convert string to lower case – string& version.

const string & GetHost(void) const

TFrom GetFrom(void) const

Get the From member data.

unsigned int

A callback function used to compare two keys in a database.

static const string kFilterSeparator

static const int kInvalidIcon

in pixel

const struct ncbi::grid::netcache::search::fields::KEY key

const CharType(& source)[N]

std::istream & in(std::istream &in_, double &x_)

A help struct for storing information about a icon.

TIconID m_Id

must be unique within the context


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