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NCBI C++ ToolKit: src/gui/widgets/aln_crossaln/layout.cpp Source File

, m_bFlipStrand(

)

, m_bInlineChildren(

)

(obj1->GetRange() < obj2->GetRange() &&

obj1->GetRange().GetTo() < obj2->GetRange().GetFrom());

runtime_error(

);

runtime_error(

);

runtime_error(

);

runtime_error(

);

runtime_error(

);

runtime_error(

);

runtime_error(

);

TObjects::const_reverse_iterator riter(objs.end());

TObjects::const_reverse_iterator rend (objs.begin());

( ; riter != rend; ++riter) {

need_extra_space =

;

intersect_range = ref->GetRange();

(intersect_range.

() > from_off) {

intersect_range.

(intersect_range.

() - from_off);

(expanded_to > intersect_range.

()) {

intersect_range.

(expanded_to);

range_holder.

(intersect_range);

inserted =

;

intersects =

;

CLayout::TLayoutRow::iterator row_iter =

std::lower_bound(iter->begin(), iter->end(), ref_obj, func);

(row_iter != iter->end()) {

ref_row_iter = *row_iter;

total_range = (*row_iter)->GetRange();

((*row_iter)->GetRange());

iter->insert(row_iter, ref);

new_range = (*iter)->GetRange();

inserted =

;

row_iter->push_back(*iter);

row_iter->push_back(*iter);

.push_back(*iter);

(

<< features.size() <<

<< spacing);

(

= 0;

< features.size(); ++

) {

<< features[

]->GetTextId() <<

<< features[

]->GetExtent().GetFrom() <<

<< features[

]->GetExtent().GetTo() <<

);

(

= 0;

<

.size(); ++

) {

(j = 0; j <

[

].size(); ++j) {

dumpRecursive(*

[

][j]);

bool LessBySize(const CLayoutObject &) const

compare this object to another, based on size

const objects::CSeq_loc & GetLocation(void) const

all other interfaces to this class throw an exception

bool LessByPos(const CLayoutObject &) const

compare this object to another, based on position

bool HasObject(CConstRef< CObject >) const

check if the wrapped object(s) is the one

EType GetType() const

retrieve the type of this object

CConstRef< CObject > GetObject(TSeqPos) const

access our core component - we wrap an object(s) of some sort.

void SetRange(const TSeqRange &range)

TSeqRange GetRange(void) const

access the position of this object.

void GetObjects(vector< CConstRef< CObject > > &) const

retrieve CObjects corresponding to this CLayoutObject

class CLayoutObject defines an interface that wraps a rectilinear abstract object.

class CLayout is a container of objects laid out in a series of rows or tracks.

static const char * pack(const char *fmt,...)

unsigned int TSeqPos

Type for sequence locations and lengths.

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

int TSignedSeqPos

Type for signed sequence position.

#define NON_CONST_ITERATE(Type, Var, Cont)

Non constant version of ITERATE macro.

TObjects & SetChildren(void)

TSeqPos m_MinDist

the minimum distance we permit two items to be within

void SetModelRect(const TModelRect &rect)

void Clear(void)

clear opur internal list of objects

bool IsFlippedStrand() const

bool IsSelected() const

object is selected

TLayoutRow & SetRow(size_t row)

vector< TLayoutRow > TLayout

void SetParent(CLayoutObject *feat)

const TLayoutRow & GetRow(size_t row) const

access a row of the layout

vector< CRef< CLayoutObject > > TObjects

const TLayout & GetLayout(void) const

access the entire layout

TModelRect GetModelRect() const

area rectangle of the object in model space

bool IsHorizontal() const

vector< TSeqRange > m_Intervals

virtual void Layout(TObjects &objects, CLayout &layout, bool side_label=false)

void SetHorizontal(bool b_horz)

vector< CRef< CObject > > TObjects

EType

type of layout objects currently supported

TSeqPos m_SideSpace

preserved left side space for label.

void SetFlippedStrand(bool b_flip)

virtual void x_CalcIntervals(void) const

TLayout & SetLayout(void)

const vector< TSeqRange > & GetIntervals(void) const

virtual TSeqRange GetRange(void) const =0

access the position of this object.

TLayoutRow & AddRow(void)

add a row to the layout

vector< CRef< CLayoutObject > > TLayoutRow

void Append(const CLayout &layout)

append an entire layout to this one

const CLayoutObject * GetParent(void) const

EChildrenLayout GetChildrenLayout(void) const

void SetChildrenLayout(EChildrenLayout type)

TLayout m_Layout

our layout. This is a nested container - a set of rows.

void Insert(const CLayout &layout, size_t row)

insert an entire layout to this one

void SetSelected(bool flag)

const TObjects & GetChildren(void) const

bool IntersectingWith(const TThisType &r) const

static TThisType GetWhole(void)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

void SetFrom(TFrom value)

Assign a value to From data member.

TTo GetTo(void) const

Get the To member data.

TFrom GetFrom(void) const

Get the From member data.

void SetTo(TTo value)

Assign a value to To data member.

constexpr auto sort(_Init &&init)

Useful/utility classes and methods.

#define row(bind, expected)

basic sort by size function

sorting functor for finding a range inside a collection of layout objects

bool operator()(const CRef< CLayoutObject > &obj1, const CRef< CLayoutObject > &obj2) const

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