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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/kdbread_8cpp_source.html below:

NCBI C++ ToolKit: src/sra/readers/sra/kdbread.cpp Source File

37 #include <vdb/vdb-priv.h> 39 #include <klib/namelist.h> 40 #include <kdb/table.h> 42 #include <kdb/namelist.h> 62 "Cannot open KTable"

, rc);

84 "Cannot open KMetadata"

, rc);

90 const char

* node_name,

93 if

(

rc_t

rc = KMetadataOpenNodeRead(meta,

x_InitPtr

(), node_name) ) {

95 if

( GetRCObject(rc) == RCObject(rcPath) &&

96

GetRCState(rc) == rcNotFound ) {

99 "Cannot open KMDataNode"

, rc, node_name);

104 "Cannot open KMDataNode"

, rc, node_name);

111 const char

* node_name,

114 if

(

rc_t

rc = KMDataNodeOpenNodeRead(parent,

x_InitPtr

(), node_name) ) {

116 if

( GetRCObject(rc) == RCObject(rcPath) &&

117

GetRCState(rc) == rcNotFound ) {

120 "Cannot open child KMDataNode"

, rc, node_name);

125 "Cannot open child KMDataNode"

, rc, node_name);

134 if

(

rc_t

rc = KMDataNodeReadAsU32(*

this

, &

value

) ) {

136 "Cannot read metadata node value"

, rc);

145 if

(

rc_t

rc = KMDataNodeReadAsU64(*

this

, &

value

) ) {

147 "Cannot read metadata node value"

, rc);

156

pair<size_t, size_t> ret;

158

&ret.first, &ret.second) ) {

160 "Cannot read metadata node data"

, rc);

169 if

( ret.first !=

size

) {

171 "Cannot read all requested data from metadata node"

172 RC

(rcApp, rcData, rcRetrieving, rcSize, rcTooBig));

181 "Cannot get metadata node child list"

, rc);

183 if

(

rc_t

rc = KNamelistCount(*

this

, &

m_Size

) ) {

185 "Cannot get size of metadata node child list"

, rc);

192 if

( index >=

size

() ) {

194 "Invalid index for a namelist"

195 RC

(rcApp, rcData, rcRetrieving, rcOffset, rcTooBig),

198 const char

* ret = 0;

199 if

(

rc_t

rc = KNamelistGet(*

this

uint32_t

(index), &ret) ) {

201 "Cannot get name from a namelist"

, rc, index);

#define NCBI_THROW3(exc_cls, err_code, msg, extra1, extra2)

Uint4 GetUint4(void) const

pair< size_t, size_t > TryToGetData(char *buffer, size_t size, size_t offset=0) const

CKMDataNode(const CKMetadata &meta, const char *node_name, EMissing missing=eMissing_Throw)

Uint8 GetUint8(void) const

void GetData(char *buffer, size_t size, size_t offset=0) const

const char * operator[](size_t index) const

CKNameList(const CKMDataNode &parent)

CKTable(const CVDBTable &table)

TObject ** x_InitPtr(void)

static const char table_name[]

#define NCBI_THROW2(exception_class, err_code, message, extra)

Throw exception with extra parameter.

uint32_t Uint4

4-byte (32-bit) unsigned integer

uint64_t Uint8

8-byte (64-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

<!DOCTYPE HTML >< html > n< header > n< title > PubSeq Gateway Help Page</title > n< style > n table

DEFINE_SRA_REF_TRAITS(KTable, const)

const struct ncbi::grid::netcache::search::fields::SIZE size

const GenericPointer< typename T::ValueType > T2 value

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