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NCBI C++ ToolKit: src/algo/phy_tree/fastme/inputs.cpp File Reference

#include <ncbi_pch.hpp>
#include <stdio.h>
#include <stdlib.h>
#include <math.h>
#include "fastme.h"
#include "graph.h"

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◆ compareSets() void compareSets ( meTreeT, meSetS, FILE *  ofile  )

Definition at line 48 of file inputs.cpp.

References depthFirstTraverse(), exit(), EXIT_FAILURE, meSet::firstNode, meEdge::head, meNode::index2, meNode::label, leaf(), NULL, meSet::secondNode, util::strcmp(), and T.

◆ depthFirstTraverse() ◆ freeMatrix() void freeMatrix ( double **  D, int  size  ) ◆ leaf() ◆ loadMatrix() double** loadMatrix ( double **  table_in, char **  labels, intsize_in, meSetS  ) ◆ loadMatrixOLD() double** loadMatrixOLD ( FILE *  ifile, intsize, meSetS  )

Definition at line 157 of file inputs.cpp.

References addToSet(), exit(), EXIT_FAILURE, i, meNode::index2, makeNewNode(), malloc(), MAX_EVENT_NAME, MAXSIZE, ncbi::grid::netcache::search::fields::size, and table.

◆ partitionSizes() void partitionSizes ( meTreeT )

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