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NCBI C++ ToolKit: src/gui/widgets/hit_matrix/hit_matrix_widget.cpp Source File

initialized =

;

,

,

);

wxPoint& pos,

wxSize&

,

style)

en = horz_sel.

() || vert_sel.

();

(horz_sel.

()) {

(vert_sel.

()) {

en = horz_sel.

() || vert_sel.

();

.Enable(! rc_m.

());

( ! s_r.

()) {

( ! q_r.

()) {

dlg.SetTitle(

(

));

(dlg.ShowModal() == wxID_OK) {

(! new_subject_id->

(*subject_id) ||

! new_query_id->

(*query_id) || ! (old_params == params)) {

query_id = new_query_id;

subject_id = new_subject_id;

wxChar*

=

(

);

curr_name =

->GetRenderer().GetScoreName();

vector<string>

;

(

.size()) {

& name = *it;

pair<double, double> range =

->GetScoreRange(name);

vector<SHitColoringParams*> params;

(dlg.ShowModal() == wxID_OK) {

wxOK | wxICON_EXCLAMATION);

vector<CHitMatrixRenderer::SGraphDescr> graph_types;

vector<string> s_graphs, q_graphs;

en_s =

, en_q =

;

dlg.

(graph_types, s_graphs, q_graphs, en_s, en_q);

(dlg.ShowModal() == wxID_OK) {

(

= 0;

< graph_types.size();

++ ) {

& name = graph_types[

].m_Type;

wxPoint ms_pos = ScreenToClient(event.GetPosition());

m_PopupPoint.m_X = m_MatrixPane->SHH_GetModelByWindow(ms_pos.x,

);

m_PopupPoint.m_Y = m_MatrixPane->SHH_GetModelByWindow(ms_pos.y,

);

wxMenu* menu = cmd_reg.

(sPopupMenu);

x_ShowDecoratedPopupMenu(menu);

.Enable(

() != 0);

CHitMatrixRenderer - renders Hit Matrix Graph, Rulers, axes, grid, sequence and features graphs.

void SetGraphColor(const string &name, const CRgbaColor &color)

void GetGraphTypes(vector< SGraphDescr > &types) const

void SetGraphs(ESequence seq, const vector< string > &graphs)

void Layout(const CGlPane &pane)

recalculates recatngles for all intrnal objects so that they are positioned correctly with regard to ...

void GetGraphs(ESequence seq, vector< string > &graphs) const

TModelRect GetSelectedHitElemsRect() const

const string & GetScoreName() const

position_type GetToOpen() const

position_type GetFrom() const

CUICommandRegistry is a centralized registry where all application commands should be registered.

static CUICommandRegistry & GetInstance()

the main instance associated with the application

wxMenu * CreateMenu(const SwxMenuItemRec *items)

create a menu from a static definition (see WX_*_MENU macros)

int RegisterCommand(CUICommand *cmd)

assumes ownership of the given object returns a command id (useful when registry is used for auto id ...

const IHitSeqId * GetSubjectId()

const IHitSeqId * GetQueryId()

void SetSeqs(CIRef< IHitMatrixDataSource > ds)

void GetParams(IHitMatrixDataSource::SParams &params) const

CRgbaColor GetGraphColor(const string &name)

void GetSelected(vector< string > &s_items, vector< string > &q_items)

void SetItems(const vector< CHitMatrixRenderer::SGraphDescr > &graphs, const vector< string > &s_sel, const vector< string > &q_sel, bool en_s, bool en_q)

string GetSelectedName() const

void SetItems(vector< SHitColoringParams * > &params, const string curr_name)

IHitMatrixDataSource - abstract Data Source for Hit Matrix Widget.

virtual TSeqRange GetQueryHitsRange()=0

virtual IHitSeqId & GetSubjectId() const =0

virtual IHitSeqId & GetQueryId() const =0

virtual objects::CBioseq_Handle GetQueryHandle()=0

virtual string GetLabel(const IHitSeqId &id)=0

virtual objects::CBioseq_Handle GetSubjectHandle()=0

virtual TSeqRange GetSubjectHitsRange()=0

IHitSeqId - abstract identifier of a sequence in an alignment.

virtual bool Equals(const IHitSeqId &id) const =0

static const struct name_t names[]

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define NON_CONST_ITERATE(Type, Var, Cont)

Non constant version of ITERATE macro.

void SetModelLimitsRect(const TModelRect &R)

void ZoomAll(int options=fZoomXY)

void SetScale(TModelUnit scale_x, TModelUnit scale_y, TModelPoint p_center)

void SetScaleRefPoint(TModelUnit scale_x, TModelUnit scale_y, TModelPoint p_ref)

void ZoomRect(const TModelRect &r)

TModelRect & GetModelLimitsRect(void)

void SetAdjustmentPolicy(int adjust_x, int adjust_y)

void Inflate(T d_x, T d_y)

void EnableZoom(bool en_x, bool en_y)

void SetVert(T bottom, T top)

TModelRect & GetVisibleRect(void)

void SetMinScaleX(TModelUnit scale)

TModelUnit GetScaleX(void) const

TModelUnit GetScaleY(void) const

void SetHorz(T left, T right)

void SetOriginType(EOriginType type_x, EOriginType type_y)

vector< CConstRef< CObject > > TConstObjects

@ eCmdZoomObjects

Zoom to Sequence.

TSeqPos GetBioseqLength(void) const

TObjectType * GetPointer(void) THROWS_NONE

Get pointer,.

position_type GetToOpen(void) const

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

TFrom GetFrom(void) const

Get the From member data.

constexpr bool empty(list< Ts... >) noexcept

const struct ncbi::grid::netcache::search::fields::SIZE size

ViewerWindowBase::OnEditMenu ViewerWindowBase::OnJustification EVT_MENU(MID_SHOW_GEOM_VLTNS, ViewerWindowBase::OnShowGeomVltns) EVT_MENU(MID_FIND_PATTERN

void SetValueRange(double min, double max)

#define WX_DEFINE_MENU(name)

New macros for defining menus for use with CUICommandRegistry.

#define WX_SUBMENU(label)

#define WX_MENU_SEPARATOR_L(label)

#define WX_MENU_ITEM(cmd)

#define WX_MENU_SEPARATOR()

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