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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/hit__matrix_2seq__graph_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/widgets/hit_matrix/seq_graph.cpp Source File

m_BackColor(0.9f, 0.9f, 0.9f),

m_TextColor(0.0f, 0.0f, 0.0f)

min_w = 1.0 / seq_sym_w;

(min_w > scale_x) {

(

bp = 0; bp != seq.length(); bp++) {

min_h = 1.0 / seq_h;

(min_h > scale_y) {

(

bp = 0; bp != seq.length(); bp++) {

s =

+ sequence::CDeflineGenerator().GenerateDefline(

);

virtual bool NeedTooltip(CGlPane &pane, int vp_x, int vp_y)

void SetBioseqHandle(objects::CBioseq_Handle &handle)

virtual void Render(CGlPane &pane)

CRef< CGlTextureFont > m_pSeqFont

CHitMatrixSeqGraph(bool b_horz)

virtual string GetTooltip()

objects::CBioseq_Handle m_Bioseq

void SetFonts(CGlTextureFont *seq_font)

virtual TVPPoint PreferredSize()

unsigned int TSeqPos

Type for sequence locations and lengths.

IRender & GetGl()

convenience function for getting current render manager

virtual void BeginText(const CGlTextureFont *font, const CRgbaColor &color)=0

Text is drawn is pixel coordinates.

TModelUnit GetOffsetY() const

virtual void EndText()=0

Pops matrices and attributes after writing text.

bool PtInRect(T x, T y) const

void Inflate(T d_x, T d_y)

virtual void PolygonMode(GLenum face, GLenum mode)=0

Set the polygon rasterization mode.

virtual void WriteText(TModelUnit x, TModelUnit y, const char *text, TModelUnit rotate_degrees=0.0)=0

Write text at specified model coords.

virtual TModelUnit TextWidth(const char *text) const

Compute and return font metrics.

TModelRect & GetVisibleRect(void)

virtual TModelUnit GetMetric(const CGlTextureFont *font, IGlFont::EMetric metric, const char *text=NULL, int len=-1) const =0

Calls the standard font metric functions except for pdf in which case it first replaces any bitmap fo...

TModelUnit GetScaleX(void) const

TModelUnit GetScaleY(void) const

TModelUnit GetOffsetX() const

virtual void ColorC(const CRgbaColor &c)=0

Set current color (glColor{3,4}{f,d}{v,})

void Rectd(GLdouble x1, GLdouble y1, GLdouble x2, GLdouble y2)

void GetSeqData(TSeqPos start, TSeqPos stop, string &buffer) const

Fill the buffer string with the sequence data for the interval [start, stop).

void SetIupacCoding(void)

Set coding to either Iupacaa or Iupacna depending on molecule type.

TObjectType * GetPointer(void) THROWS_NONE

Get pointer,.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

unsigned int

A callback function used to compare two keys in a database.

static const int kTextOffset

const struct ncbi::grid::netcache::search::fields::SIZE size

The NCBI C++/STL use hints.

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