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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/histogram__conf_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/widgets/seq_graphic/histogram_conf.cpp Source File

65 if

(iter != sm_TypeMap.end()) {

74 for

(iter = sm_TypeMap.begin(); iter != sm_TypeMap.end(); ++iter) {

75 if

(iter->second ==

type

) {

103 if

(iter != sm_ScaleMap.end()) {

115 for

(iter = sm_ScaleMap.begin(); iter != sm_ScaleMap.end(); ++iter) {

116 if

(iter->second == scale) {

125 if

(iter->first == scale) {

137 if

(sScaleTMS ==

"log2 scaled"

) {

139

}

else if

(sScaleTMS ==

"linear scaled"

) {

141

}

else if

(sScaleTMS ==

"loge scaled"

) {

143

}

else if

(sScaleTMS ==

"log10 scaled"

) {

156 const string

& curr_size)

194 "."

+ curr_color +

".ColorSet"

;

195

sub_view =

registry

.GetReadView(sub_key);

197

sub_view.

GetKeys

(color_keys);

215 const string

& curr_size)

const 221 if

( !params->

GetDirty

() )

continue

;

246

curr_color +

"."

"ColorSet"

;

275

vector<string>::reverse_iterator riter(feat_hierarchy.end());

276

vector<string>::reverse_iterator rend(feat_hierarchy.begin());

278 for

( ; riter != rend; ++riter) {

344 if

( !feat_hierarchy.empty() &&

363 if

(iter != settings.

end

()) {

364

*iter->second = *hist_params;

366

settings[new_name] = hist_params;

373

(option_name,

"Linear/Log Scale"

375 "Scale for graph data"

);

380 "Shown at linear scale"

381 "Graph data is shown at linear scale"

));

386 "Shown at log base 10 scale"

387 "Graph data is shown at logarithmic (base 10) scale"

));

392 "Shown at natural logarithm (base e) scale"

393 "Graph data is shown at natural logrithm (base e) scale"

));

398 "Shown at log base 2 scale"

399 "Graph data is shown at logarithmic (base 2) scale"

));

CConfigurableItems - a static list of items that can be configured.

vector< string > GetStoragekeys(int subtype) const

Get hierarchy of keys above this subtype, starting with "Master" example, eSubtype_gene,...

static CGuiRegistry & GetInstance()

access the application-wide singleton

void LoadSettings(const string &curr_color, const string &curr_size)

CHistParamsManager implementation.

THistParams m_HistSettings

cached histogram rendering parameters.

bool HasSettings(const string &name) const

Check if there is settings for a given name.

void SaveSettings(const string &curr_color, const string &curr_size) const

bool IsTempSettings(const string &name) const

Check if there is settings for a given name.

THistParams m_TempHistSettings

temporary histogram settings.

CRef< CHistParams > GetDefHistParams() const

CRef< CHistParams > GetHistParams(TFeatSubtype subtype) const

Get histogram settings using feature subtype.

void x_AddSettings(const string &name, CRef< CHistParams > hist_params, THistParams &settings)

static CRef< objects::CChoice > CreateScaleOptions(const string &option_name, CHistParams::EScale option_value)

CRgbaColor m_SmearColorMin

static EType TypeStrToValue(const string &type)

int m_SDeviationThreshold

CRgbaColor m_OutlierColor

static EScale ScaleStrToValue(const string &scale)

static const string & TypeValueToStr(CHistParams::EType type)

static const string & ScaleValueToStr(CHistParams::EScale scale)

static string ScaleTMSToStr(const string &sScaleTMS)

converts values returned in TMS "stored_scale" attribute (e.g.

EScale m_Scale

requested scale

static const string & ScaleValueToName(CHistParams::EScale scale)

CRgbaColor m_SmearColorMax

class CRegistryReadView provides a nested hierarchical view at a particular key.

int GetInt(const string &key, int default_val=0) const

access a named key at this level, with no recursion

double GetReal(const string &key, double default_val=0) const

bool GetBool(const string &key, bool default_val=false) const

list< SKeyInfo > TKeys

retrieve information about all keys in the registry

void GetTopKeys(TKeys &keys) const

Retrieve information about the top level keys in this view.

string GetString(const string &key, const string &default_val=kEmptyStr) const

void GetKeys(TKeys &keys) const

Retrieve information about all keys in this view.

void Set(const string &key, int val)

access a named key at this level, with no recursion

class CRgbaColor provides a simple abstraction for managing colors.

static CRegistryReadView GetSizeReadView(const CGuiRegistry &reg, const string &base_key, const string &sect, const string &key, const string &def_sect="")

static CRegistryReadView GetColorReadView(const CGuiRegistry &reg, const string &base_key, const string &sect, const string &key, const string &def_sect="")

Create a read view specifically for 'Color' section.

static CRegistryReadView GetReadView(const CGuiRegistry &reg, const string &base_key, const string &curr_key, const string &def_key1="", const string &def_key2="", const string &def_key3="")

read/readwrite view creation helper methods.

static CRegistryWriteView GetWriteView(CGuiRegistry &reg, const string &base_key, const string &curr_key, const string &def_key1="", const string &def_key2="", const string &def_key3="")

static const string & ColorKey()

static CRegistryWriteView GetColorRWView(CGuiRegistry &reg, const string &base_key, const string &sect, const string &key, const string &def_sect="")

static CRegistryWriteView GetSizeRWView(CGuiRegistry &reg, const string &base_key, const string &sect, const string &key, const string &def_sect="")

static void SetColor(CRegistryWriteView &view, const string &key, const CRgbaColor &color)

static void GetColor(const CRegistryReadView &view, const string &key, CRgbaColor &color)

static const CFeatList * GetFeatList()

class CStaticArrayMap<> provides access to a static array in much the same way as CStaticArraySet<>,...

TBase::const_iterator const_iterator

static CRef< objects::CChoice > CreateChoice(const string &name, const string &disp_name, const string &curr_val, const string &help, bool optional=false)

static CRef< objects::CChoiceItem > CreateChoiceItem(const string &name, const string &disp_name, const string &help, const string &legend_txt, bool optional=false)

container_type::const_iterator const_iterator

container_type::iterator iterator

const_iterator end() const

const_iterator find(const key_type &key) const

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define NCBI_THROW(exception_class, err_code, message)

Generic macro to throw an exception, given the exception class, error code and message string.

static const string & GetUnnamedAnnot()

Get the commonly used symbol representing a unnnamed annotation.

static CRgbaColor RotateColor(const CRgbaColor &c, float degrees)

Rotate the hue of the color by degrees.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static string & Replace(const string &src, const string &search, const string &replace, string &dst, SIZE_TYPE start_pos=0, SIZE_TYPE max_replace=0, SIZE_TYPE *num_replace=0)

Replace occurrences of a substring within a string.

static const string kHistParamsKey("GBPlugins.SeqGraphicHistogram")

static const TScaleStr s_ScaleStrs[]

DEFINE_STATIC_ARRAY_MAP(TTypeMap, sm_TypeMap, s_TypeStrs)

static const string kDefHistKey("Default")

static const TTypeStr s_TypeStrs[]

SStaticPair< const char *, CHistParams::EType > TTypeStr

CHistParams.

static const map< CHistParams::EScale, string > sm_ScaleNames

SStaticPair< const char *, CHistParams::EScale > TScaleStr

CStaticArrayMap< string, CHistParams::EType > TTypeMap

CStaticArrayMap< string, CHistParams::EScale > TScaleMap

const struct ncbi::grid::netcache::search::fields::KEY key

Template structure SStaticPair is simlified replacement of STL pair<> Main reason of introducing this...

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