Definition at line 89 of file HG_Alignment_.hpp.
◆ E_memberIndex [2/11] Enumerator e__allMandatory e_link e_description e_caption e_provider e_other_links e_other_commentaries e_taxid e_geneidDefinition at line 101 of file HG_Commentary_.hpp.
◆ E_memberIndex [3/11] ◆ E_memberIndex [4/11] Enumerator e__allMandatory e_begin e_end e_pssm_id e_cdd_id e_cdd_nameDefinition at line 92 of file HG_Domain_.hpp.
◆ E_memberIndex [5/11] Enumerator e__allMandatory e_hg_id e_version e_title e_caption e_taxid e_genes e_cr_date e_up_date e_distances e_commentaries e_warnings e_nodeDefinition at line 108 of file HG_Entry_.hpp.
◆ E_memberIndex [6/11] ◆ E_memberIndex [7/11] Enumerator e__allMandatory e_geneid e_otherid e_symbol e_aliases e_title e_taxid e_prot_gi e_prot_acc e_prot_len e_nuc_gi e_nuc_acc e_gene_links e_prot_links e_domains e_chr e_location e_locus_tagDefinition at line 111 of file HG_Gene_.hpp.
◆ E_memberIndex [8/11] Enumerator e__allMandatory e_hypertext e_urlDefinition at line 89 of file HG_Link_.hpp.
◆ E_memberIndex [9/11] Enumerator e__allMandatory e_type e_id e_caption e_current_node e_children e_branch_lenDefinition at line 109 of file HG_Node_.hpp.
◆ E_memberIndex [10/11] Enumerator e__allMandatory e_id e_id_typeDefinition at line 94 of file HG_Node_id_.hpp.
◆ E_memberIndex [11/11] Enumerator e__allMandatory e_gi1 e_gi2 e_nuc_change e_nuc_change_jc e_prot_change e_ka e_ks e_knr e_knc e_recip_bestDefinition at line 93 of file HG_Stats_.hpp.
◆ EId_type Enumerator eId_type_none eId_type_geneid eId_type_hidDefinition at line 80 of file HG_Node_id_.hpp.
◆ EType Enumerator eType_family eType_ortholog eType_paralog eType_leafDefinition at line 90 of file HG_Node_.hpp.
◆ CanGet() [1/2] bool CHG_AlignmentSet_Base::CanGet ( void ) const inlineCheck if it is safe to call Get method.
Definition at line 158 of file HG_AlignmentSet_.hpp.
◆ CanGet() [2/2] bool CHG_CommentaryContainer_Base::CanGet ( void ) const inline ◆ CanGetAliases() bool CHG_Gene_Base::CanGetAliases ( void ) const inlineCheck if it is safe to call GetAliases method.
Definition at line 937 of file HG_Gene_.hpp.
◆ CanGetAlignment() bool CHG_Alignment_Base::CanGetAlignment ( void ) const inlineCheck if it is safe to call GetAlignment method.
Definition at line 251 of file HG_Alignment_.hpp.
◆ CanGetBegin() bool CHG_Domain_Base::CanGetBegin ( void ) const inline ◆ CanGetBranch_len() bool CHG_Node_Base::CanGetBranch_len ( void ) const inline ◆ CanGetCaption() [1/3] bool CHG_Commentary_Base::CanGetCaption ( void ) const inline ◆ CanGetCaption() [2/3] bool CHG_Entry_Base::CanGetCaption ( void ) const inline ◆ CanGetCaption() [3/3] bool CHG_Node_Base::CanGetCaption ( void ) const inline ◆ CanGetCdd_id() bool CHG_Domain_Base::CanGetCdd_id ( void ) const inline ◆ CanGetCdd_name() bool CHG_Domain_Base::CanGetCdd_name ( void ) const inline ◆ CanGetChildren() bool CHG_Node_Base::CanGetChildren ( void ) const inlineCheck if it is safe to call GetChildren method.
Definition at line 552 of file HG_Node_.hpp.
◆ CanGetChr() bool CHG_Gene_Base::CanGetChr ( void ) const inline ◆ CanGetCommentaries() [1/2] bool CHG_CommentarySet_Base::CanGetCommentaries ( void ) const inlineCheck if it is safe to call GetCommentaries method.
Definition at line 338 of file HG_CommentarySet_.hpp.
◆ CanGetCommentaries() [2/2] bool CHG_Entry_Base::CanGetCommentaries ( void ) const inlineCheck if it is safe to call GetCommentaries method.
Definition at line 918 of file HG_Entry_.hpp.
◆ CanGetCr_date() bool CHG_Entry_Base::CanGetCr_date ( void ) const inline ◆ CanGetCurrent_node() bool CHG_Node_Base::CanGetCurrent_node ( void ) const inlineCheck if it is safe to call GetCurrent_node method.
Definition at line 502 of file HG_Node_.hpp.
◆ CanGetDescription() bool CHG_Commentary_Base::CanGetDescription ( void ) const inline ◆ CanGetDistances() bool CHG_Entry_Base::CanGetDistances ( void ) const inlineCheck if it is safe to call GetDistances method.
Definition at line 893 of file HG_Entry_.hpp.
◆ CanGetDomains() bool CHG_Gene_Base::CanGetDomains ( void ) const inlineCheck if it is safe to call GetDomains method.
Definition at line 1341 of file HG_Gene_.hpp.
◆ CanGetEnd() bool CHG_Domain_Base::CanGetEnd ( void ) const inline ◆ CanGetEntries() bool CHG_EntrySet_Base::CanGetEntries ( void ) const inlineCheck if it is safe to call GetEntries method.
Definition at line 166 of file HG_EntrySet_.hpp.
◆ CanGetGene_links() bool CHG_Gene_Base::CanGetGene_links ( void ) const inline ◆ CanGetGeneid() [1/2] bool CHG_Commentary_Base::CanGetGeneid ( void ) const inline ◆ CanGetGeneid() [2/2] bool CHG_Gene_Base::CanGetGeneid ( void ) const inline ◆ CanGetGenes() bool CHG_Entry_Base::CanGetGenes ( void ) const inline ◆ CanGetGi1() bool CHG_Stats_Base::CanGetGi1 ( void ) const inline ◆ CanGetGi2() bool CHG_Stats_Base::CanGetGi2 ( void ) const inline ◆ CanGetHg_id() [1/3] bool CHG_Alignment_Base::CanGetHg_id ( void ) const inline ◆ CanGetHg_id() [2/3] bool CHG_CommentarySet_Base::CanGetHg_id ( void ) const inline ◆ CanGetHg_id() [3/3] bool CHG_Entry_Base::CanGetHg_id ( void ) const inline ◆ CanGetHypertext() bool CHG_Link_Base::CanGetHypertext ( void ) const inline ◆ CanGetId() [1/2] bool CHG_Node_Base::CanGetId ( void ) const inlineCheck if it is safe to call GetId method.
Definition at line 425 of file HG_Node_.hpp.
◆ CanGetId() [2/2] bool CHG_Node_id_Base::CanGetId ( void ) const inline ◆ CanGetId_type() bool CHG_Node_id_Base::CanGetId_type ( void ) const inline ◆ CanGetKa() bool CHG_Stats_Base::CanGetKa ( void ) const inline ◆ CanGetKnc() bool CHG_Stats_Base::CanGetKnc ( void ) const inline ◆ CanGetKnr() bool CHG_Stats_Base::CanGetKnr ( void ) const inline ◆ CanGetKs() bool CHG_Stats_Base::CanGetKs ( void ) const inline ◆ CanGetLink() bool CHG_Commentary_Base::CanGetLink ( void ) const inlineCheck if it is safe to call GetLink method.
Definition at line 443 of file HG_Commentary_.hpp.
◆ CanGetLocation() bool CHG_Gene_Base::CanGetLocation ( void ) const inline ◆ CanGetLocus_tag() bool CHG_Gene_Base::CanGetLocus_tag ( void ) const inline ◆ CanGetNode() bool CHG_Entry_Base::CanGetNode ( void ) const inline ◆ CanGetNuc_acc() bool CHG_Gene_Base::CanGetNuc_acc ( void ) const inline ◆ CanGetNuc_change() bool CHG_Stats_Base::CanGetNuc_change ( void ) const inline ◆ CanGetNuc_change_jc() bool CHG_Stats_Base::CanGetNuc_change_jc ( void ) const inline ◆ CanGetNuc_gi() bool CHG_Gene_Base::CanGetNuc_gi ( void ) const inline ◆ CanGetOther_commentaries() bool CHG_Commentary_Base::CanGetOther_commentaries ( void ) const inlineCheck if it is safe to call GetOther_commentaries method.
Definition at line 639 of file HG_Commentary_.hpp.
◆ CanGetOther_links() bool CHG_Commentary_Base::CanGetOther_links ( void ) const inlineCheck if it is safe to call GetOther_links method.
Definition at line 614 of file HG_Commentary_.hpp.
◆ CanGetOtherid() bool CHG_Gene_Base::CanGetOtherid ( void ) const inline ◆ CanGetProt_acc() bool CHG_Gene_Base::CanGetProt_acc ( void ) const inline ◆ CanGetProt_change() bool CHG_Stats_Base::CanGetProt_change ( void ) const inline ◆ CanGetProt_gi() bool CHG_Gene_Base::CanGetProt_gi ( void ) const inline ◆ CanGetProt_len() bool CHG_Gene_Base::CanGetProt_len ( void ) const inline ◆ CanGetProt_links() bool CHG_Gene_Base::CanGetProt_links ( void ) const inlineCheck if it is safe to call GetProt_links method.
Definition at line 1316 of file HG_Gene_.hpp.
◆ CanGetProvider() bool CHG_Commentary_Base::CanGetProvider ( void ) const inline ◆ CanGetPssm_id() bool CHG_Domain_Base::CanGetPssm_id ( void ) const inline ◆ CanGetRecip_best() bool CHG_Stats_Base::CanGetRecip_best ( void ) const inline ◆ CanGetSymbol() bool CHG_Gene_Base::CanGetSymbol ( void ) const inline ◆ CanGetTaxid() [1/3] bool CHG_Commentary_Base::CanGetTaxid ( void ) const inline ◆ CanGetTaxid() [2/3] bool CHG_Entry_Base::CanGetTaxid ( void ) const inline ◆ CanGetTaxid() [3/3] bool CHG_Gene_Base::CanGetTaxid ( void ) const inline ◆ CanGetTitle() [1/3] bool CHG_CommentarySet_Base::CanGetTitle ( void ) const inline ◆ CanGetTitle() [2/3] bool CHG_Entry_Base::CanGetTitle ( void ) const inline ◆ CanGetTitle() [3/3] bool CHG_Gene_Base::CanGetTitle ( void ) const inline ◆ CanGetType() bool CHG_Node_Base::CanGetType ( void ) const inline ◆ CanGetUp_date() bool CHG_Entry_Base::CanGetUp_date ( void ) const inline ◆ CanGetUrl() bool CHG_Link_Base::CanGetUrl ( void ) const inline ◆ CanGetVersion() bool CHG_Entry_Base::CanGetVersion ( void ) const inline ◆ CanGetWarnings() bool CHG_Entry_Base::CanGetWarnings ( void ) const inlineCheck if it is safe to call GetWarnings method.
Definition at line 943 of file HG_Entry_.hpp.
◆ CHG_Alignment() [1/2] ◆ CHG_Alignment() [2/2] CHG_Alignment::CHG_Alignment ( void ) inlineDefinition at line 86 of file HG_Alignment.hpp.
◆ CHG_Alignment_Base() [1/2] ◆ CHG_Alignment_Base() [2/2] ◆ CHG_AlignmentSet() [1/2] ◆ CHG_AlignmentSet() [2/2] ◆ CHG_AlignmentSet_Base() [1/2] ◆ CHG_AlignmentSet_Base() [2/2] ◆ CHG_Commentary() [1/2] ◆ CHG_Commentary() [2/2] CHG_Commentary::CHG_Commentary ( void ) inlineDefinition at line 86 of file HG_Commentary.hpp.
◆ CHG_Commentary_Base() [1/2] ◆ CHG_Commentary_Base() [2/2] ◆ CHG_CommentaryContainer() [1/2] ◆ CHG_CommentaryContainer() [2/2] ◆ CHG_CommentaryContainer_Base() [1/2] ◆ CHG_CommentaryContainer_Base() [2/2] END_CLASS_INFO CHG_CommentaryContainer_Base::CHG_CommentaryContainer_Base ( void ) ◆ CHG_CommentarySet() [1/2] ◆ CHG_CommentarySet() [2/2] ◆ CHG_CommentarySet_Base() [1/2] ◆ CHG_CommentarySet_Base() [2/2] END_CLASS_INFO CHG_CommentarySet_Base::CHG_CommentarySet_Base ( void ) ◆ CHG_Domain() [1/2] ◆ CHG_Domain() [2/2] CHG_Domain::CHG_Domain ( void ) inlineDefinition at line 86 of file HG_Domain.hpp.
◆ CHG_Domain_Base() [1/2] ◆ CHG_Domain_Base() [2/2] ◆ CHG_Entry_Base() [1/2] ◆ CHG_Entry_Base() [2/2] ◆ CHG_EntrySet() [1/2] ◆ CHG_EntrySet() [2/2] CHG_EntrySet::CHG_EntrySet ( void ) inlineDefinition at line 86 of file HG_EntrySet.hpp.
◆ CHG_EntrySet_Base() [1/2] ◆ CHG_EntrySet_Base() [2/2] ◆ CHG_Gene_Base() [1/2] ◆ CHG_Gene_Base() [2/2] ◆ CHG_Link() [1/2] ◆ CHG_Link() [2/2] CHG_Link::CHG_Link ( void ) inlineDefinition at line 86 of file HG_Link.hpp.
◆ CHG_Link_Base() [1/2] ◆ CHG_Link_Base() [2/2] ◆ CHG_Node() [1/2] ◆ CHG_Node() [2/2] CHG_Node::CHG_Node ( void ) inlineDefinition at line 86 of file HG_Node.hpp.
◆ CHG_Node_Base() [1/2] ◆ CHG_Node_Base() [2/2] ◆ CHG_Node_id() [1/2] ◆ CHG_Node_id() [2/2] CHG_Node_id::CHG_Node_id ( void ) inlineDefinition at line 86 of file HG_Node_id.hpp.
◆ CHG_Node_id_Base() [1/2] ◆ CHG_Node_id_Base() [2/2] ◆ CHG_Stats() [1/2] ◆ CHG_Stats() [2/2] CHG_Stats::CHG_Stats ( void ) inlineDefinition at line 86 of file HG_Stats.hpp.
◆ CHG_Stats_Base() [1/2] ◆ CHG_Stats_Base() [2/2] ◆ DECLARE_INTERNAL_TYPE_INFO() [1/13] CHG_Alignment_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [2/13] CHG_AlignmentSet_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [3/13] CHG_Commentary_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [4/13] CHG_CommentaryContainer_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [5/13] CHG_CommentarySet_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [6/13] CHG_Domain_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [7/13] CHG_Entry_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [8/13] CHG_EntrySet_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [9/13] CHG_Gene_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [10/13] CHG_Link_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [11/13] CHG_Node_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [12/13] CHG_Node_id_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ DECLARE_INTERNAL_TYPE_INFO() [13/13] CHG_Stats_Base::DECLARE_INTERNAL_TYPE_INFO ( ) ◆ EId_type()Access to EId_type's attributes (values, names) as defined in spec.
◆ EType()Access to EType's attributes (values, names) as defined in spec.
◆ Get() [1/2] ◆ Get() [2/2] ◆ GetAliases() ◆ GetAlignment() ◆ GetBegin() ◆ GetBranch_len() ◆ GetCaption() [1/3] ◆ GetCaption() [2/3] ◆ GetCaption() [3/3] ◆ GetCdd_id() ◆ GetCdd_name() ◆ GetChildren() ◆ GetChr() ◆ GetCommentaries() [1/2] ◆ GetCommentaries() [2/2] ◆ GetCr_date() ◆ GetCurrent_node() ◆ GetDescription() ◆ GetDistances() ◆ GetDomains() ◆ GetEnd() ◆ GetEntries() ◆ GetGene_links() ◆ GetGeneid() [1/2] ◆ GetGeneid() [2/2] ◆ GetGenes() ◆ GetGi1() ◆ GetGi2() ◆ GetHg_id() [1/3] ◆ GetHg_id() [2/3] ◆ GetHg_id() [3/3] ◆ GetHypertext() ◆ GetId() [1/2] ◆ GetId() [2/2] ◆ GetId_type() ◆ GetKa() ◆ GetKnc() ◆ GetKnr() ◆ GetKs() ◆ GetLink() ◆ GetLocation() ◆ GetLocus_tag() ◆ GetNode() ◆ GetNuc_acc() ◆ GetNuc_change() ◆ GetNuc_change_jc() ◆ GetNuc_gi() ◆ GetOther_commentaries() ◆ GetOther_links() ◆ GetOtherid() ◆ GetProt_acc() ◆ GetProt_change() ◆ GetProt_gi() ◆ GetProt_len() ◆ GetProt_links() ◆ GetProvider() ◆ GetPssm_id() ◆ GetRecip_best() ◆ GetSymbol() ◆ GetTaxid() [1/3] ◆ GetTaxid() [2/3] ◆ GetTaxid() [3/3] ◆ GetTitle() [1/3] ◆ GetTitle() [2/3] ◆ GetTitle() [3/3] ◆ GetType() ◆ GetUp_date() ◆ GetUrl() ◆ GetVersion() ◆ GetWarnings() ◆ IsSet() [1/2] bool CHG_AlignmentSet_Base::IsSet ( void ) const inline ◆ IsSet() [2/2] bool CHG_CommentaryContainer_Base::IsSet ( void ) const inline ◆ IsSetAliases() bool CHG_Gene_Base::IsSetAliases ( void ) const inlineCheck if a value has been assigned to Aliases data member.
Data member Aliases is optional; its type is defined as 'typedef list< string > TAliases'
Definition at line 931 of file HG_Gene_.hpp.
References CHG_Gene_Base::m_set_State.
Referenced by CHG_Gene::GetLabel().
◆ IsSetAlignment() bool CHG_Alignment_Base::IsSetAlignment ( void ) const inline ◆ IsSetBegin() bool CHG_Domain_Base::IsSetBegin ( void ) const inline ◆ IsSetBranch_len() bool CHG_Node_Base::IsSetBranch_len ( void ) const inline ◆ IsSetCaption() [1/3] bool CHG_Commentary_Base::IsSetCaption ( void ) const inline ◆ IsSetCaption() [2/3] bool CHG_Entry_Base::IsSetCaption ( void ) const inline ◆ IsSetCaption() [3/3] bool CHG_Node_Base::IsSetCaption ( void ) const inline ◆ IsSetCdd_id() bool CHG_Domain_Base::IsSetCdd_id ( void ) const inline ◆ IsSetCdd_name() bool CHG_Domain_Base::IsSetCdd_name ( void ) const inline ◆ IsSetChildren() bool CHG_Node_Base::IsSetChildren ( void ) const inline ◆ IsSetChr() bool CHG_Gene_Base::IsSetChr ( void ) const inline ◆ IsSetCommentaries() [1/2] bool CHG_CommentarySet_Base::IsSetCommentaries ( void ) const inlineCheck if a value has been assigned to Commentaries data member.
Data member Commentaries is mandatory; its type is defined as 'typedef list< CRef< CHG_Commentary > > TCommentaries'
Definition at line 332 of file HG_CommentarySet_.hpp.
References CHG_CommentarySet_Base::m_set_State.
◆ IsSetCommentaries() [2/2] bool CHG_Entry_Base::IsSetCommentaries ( void ) const inlineCheck if a value has been assigned to Commentaries data member.
Data member Commentaries is optional; its type is defined as 'typedef list< CRef< CHG_CommentarySet > > TCommentaries'
Definition at line 912 of file HG_Entry_.hpp.
References CHG_Entry_Base::m_set_State.
◆ IsSetCr_date() bool CHG_Entry_Base::IsSetCr_date ( void ) const inline ◆ IsSetCurrent_node() bool CHG_Node_Base::IsSetCurrent_node ( void ) const inline ◆ IsSetDescription() bool CHG_Commentary_Base::IsSetDescription ( void ) const inline ◆ IsSetDistances() bool CHG_Entry_Base::IsSetDistances ( void ) const inlineCheck if a value has been assigned to Distances data member.
Data member Distances is optional; its type is defined as 'typedef list< CRef< CHG_Stats > > TDistances'
Definition at line 887 of file HG_Entry_.hpp.
References CHG_Entry_Base::m_set_State.
◆ IsSetDomains() bool CHG_Gene_Base::IsSetDomains ( void ) const inlineCheck if a value has been assigned to Domains data member.
Data member Domains is optional; its type is defined as 'typedef list< CRef< CHG_Domain > > TDomains'
Definition at line 1335 of file HG_Gene_.hpp.
References CHG_Gene_Base::m_set_State.
◆ IsSetEnd() bool CHG_Domain_Base::IsSetEnd ( void ) const inline ◆ IsSetEntries() bool CHG_EntrySet_Base::IsSetEntries ( void ) const inlinehomologene entry Check if a value has been assigned to Entries data member.
Data member Entries is mandatory; its type is defined as 'typedef list< CRef< CHG_Entry > > TEntries'
Definition at line 160 of file HG_EntrySet_.hpp.
References CHG_EntrySet_Base::m_set_State.
◆ IsSetGene_links() bool CHG_Gene_Base::IsSetGene_links ( void ) const inline ◆ IsSetGeneid() [1/2] bool CHG_Commentary_Base::IsSetGeneid ( void ) const inline ◆ IsSetGeneid() [2/2] bool CHG_Gene_Base::IsSetGeneid ( void ) const inline ◆ IsSetGenes() bool CHG_Entry_Base::IsSetGenes ( void ) const inline ◆ IsSetGi1() bool CHG_Stats_Base::IsSetGi1 ( void ) const inline ◆ IsSetGi2() bool CHG_Stats_Base::IsSetGi2 ( void ) const inline ◆ IsSetHg_id() [1/3] bool CHG_Alignment_Base::IsSetHg_id ( void ) const inline ◆ IsSetHg_id() [2/3] bool CHG_CommentarySet_Base::IsSetHg_id ( void ) const inline ◆ IsSetHg_id() [3/3] bool CHG_Entry_Base::IsSetHg_id ( void ) const inline ◆ IsSetHypertext() bool CHG_Link_Base::IsSetHypertext ( void ) const inline ◆ IsSetId() [1/2] bool CHG_Node_Base::IsSetId ( void ) const inlineCheck if a value has been assigned to Id data member.
Data member Id is mandatory; its type is defined as 'typedef CHG_Node_id TId'
Definition at line 419 of file HG_Node_.hpp.
References CHG_Node_Base::m_Id.
◆ IsSetId() [2/2] bool CHG_Node_id_Base::IsSetId ( void ) const inline ◆ IsSetId_type() bool CHG_Node_id_Base::IsSetId_type ( void ) const inline ◆ IsSetKa() bool CHG_Stats_Base::IsSetKa ( void ) const inline ◆ IsSetKnc() bool CHG_Stats_Base::IsSetKnc ( void ) const inline ◆ IsSetKnr() bool CHG_Stats_Base::IsSetKnr ( void ) const inline ◆ IsSetKs() bool CHG_Stats_Base::IsSetKs ( void ) const inline ◆ IsSetLink() bool CHG_Commentary_Base::IsSetLink ( void ) const inline ◆ IsSetLocation() bool CHG_Gene_Base::IsSetLocation ( void ) const inline ◆ IsSetLocus_tag() bool CHG_Gene_Base::IsSetLocus_tag ( void ) const inline ◆ IsSetNode() bool CHG_Entry_Base::IsSetNode ( void ) const inline ◆ IsSetNuc_acc() bool CHG_Gene_Base::IsSetNuc_acc ( void ) const inline ◆ IsSetNuc_change() bool CHG_Stats_Base::IsSetNuc_change ( void ) const inline ◆ IsSetNuc_change_jc() bool CHG_Stats_Base::IsSetNuc_change_jc ( void ) const inline ◆ IsSetNuc_gi() bool CHG_Gene_Base::IsSetNuc_gi ( void ) const inline ◆ IsSetOther_commentaries() bool CHG_Commentary_Base::IsSetOther_commentaries ( void ) const inlineCheck if a value has been assigned to Other_commentaries data member.
Data member Other_commentaries is optional; its type is defined as 'typedef list< CRef< CHG_Commentary > > TOther_commentaries'
Definition at line 633 of file HG_Commentary_.hpp.
References CHG_Commentary_Base::m_set_State.
◆ IsSetOther_links() bool CHG_Commentary_Base::IsSetOther_links ( void ) const inline ◆ IsSetOtherid() bool CHG_Gene_Base::IsSetOtherid ( void ) const inline ◆ IsSetProt_acc() bool CHG_Gene_Base::IsSetProt_acc ( void ) const inline ◆ IsSetProt_change() bool CHG_Stats_Base::IsSetProt_change ( void ) const inline ◆ IsSetProt_gi() bool CHG_Gene_Base::IsSetProt_gi ( void ) const inline ◆ IsSetProt_len() bool CHG_Gene_Base::IsSetProt_len ( void ) const inline ◆ IsSetProt_links() bool CHG_Gene_Base::IsSetProt_links ( void ) const inline ◆ IsSetProvider() bool CHG_Commentary_Base::IsSetProvider ( void ) const inline ◆ IsSetPssm_id() bool CHG_Domain_Base::IsSetPssm_id ( void ) const inline ◆ IsSetRecip_best() bool CHG_Stats_Base::IsSetRecip_best ( void ) const inline ◆ IsSetSymbol() bool CHG_Gene_Base::IsSetSymbol ( void ) const inline ◆ IsSetTaxid() [1/3] bool CHG_Commentary_Base::IsSetTaxid ( void ) const inline ◆ IsSetTaxid() [2/3] bool CHG_Entry_Base::IsSetTaxid ( void ) const inline ◆ IsSetTaxid() [3/3] bool CHG_Gene_Base::IsSetTaxid ( void ) const inline ◆ IsSetTitle() [1/3] bool CHG_CommentarySet_Base::IsSetTitle ( void ) const inline ◆ IsSetTitle() [2/3] bool CHG_Entry_Base::IsSetTitle ( void ) const inline ◆ IsSetTitle() [3/3] bool CHG_Gene_Base::IsSetTitle ( void ) const inline ◆ IsSetType() bool CHG_Node_Base::IsSetType ( void ) const inline ◆ IsSetUp_date() bool CHG_Entry_Base::IsSetUp_date ( void ) const inline ◆ IsSetUrl() bool CHG_Link_Base::IsSetUrl ( void ) const inline ◆ IsSetVersion() bool CHG_Entry_Base::IsSetVersion ( void ) const inline ◆ IsSetWarnings() bool CHG_Entry_Base::IsSetWarnings ( void ) const inlineCheck if a value has been assigned to Warnings data member.
Data member Warnings is optional; its type is defined as 'typedef list< string > TWarnings'
Definition at line 937 of file HG_Entry_.hpp.
References CHG_Entry_Base::m_set_State.
◆ operator const Tdata &() [1/2] ◆ operator const Tdata &() [2/2] ◆ operator Tdata &() [1/2] ◆ operator Tdata &() [2/2] ◆ operator=() [1/24] ◆ operator=() [2/24] ◆ operator=() [3/24] ◆ operator=() [4/24] ◆ operator=() [5/24] ◆ operator=() [6/24] ◆ operator=() [7/24] ◆ operator=() [8/24] ◆ operator=() [9/24] ◆ operator=() [10/24] ◆ operator=() [11/24] ◆ operator=() [12/24] ◆ operator=() [13/24] ◆ operator=() [14/24] ◆ operator=() [15/24] ◆ operator=() [16/24] ◆ operator=() [17/24] ◆ operator=() [18/24] ◆ operator=() [19/24] ◆ operator=() [20/24] ◆ operator=() [21/24] ◆ operator=() [22/24] ◆ operator=() [23/24] ◆ operator=() [24/24] ◆ Reset() [1/13] void CHG_Alignment_Base::Reset ( void ) virtual ◆ Reset() [2/13] void CHG_AlignmentSet_Base::Reset ( void ) ◆ Reset() [3/13] void CHG_Commentary_Base::Reset ( void ) virtual ◆ Reset() [4/13] void CHG_CommentaryContainer_Base::Reset ( void ) ◆ Reset() [5/13] void CHG_CommentarySet_Base::Reset ( void ) virtual ◆ Reset() [6/13] void CHG_Domain_Base::Reset ( void ) virtual ◆ Reset() [7/13] void CHG_Entry_Base::Reset ( void ) virtualReset the whole object.
Definition at line 142 of file HG_Entry_.cpp.
References CHG_Entry_Base::ResetCaption(), CHG_Entry_Base::ResetCommentaries(), CHG_Entry_Base::ResetCr_date(), CHG_Entry_Base::ResetDistances(), CHG_Entry_Base::ResetGenes(), CHG_Entry_Base::ResetHg_id(), CHG_Entry_Base::ResetNode(), CHG_Entry_Base::ResetTaxid(), CHG_Entry_Base::ResetTitle(), CHG_Entry_Base::ResetUp_date(), CHG_Entry_Base::ResetVersion(), and CHG_Entry_Base::ResetWarnings().
◆ Reset() [8/13] void CHG_EntrySet_Base::Reset ( void ) virtual ◆ Reset() [9/13] void CHG_Gene_Base::Reset ( void ) virtualReset the whole object.
Definition at line 130 of file HG_Gene_.cpp.
References CHG_Gene_Base::ResetAliases(), CHG_Gene_Base::ResetChr(), CHG_Gene_Base::ResetDomains(), CHG_Gene_Base::ResetGene_links(), CHG_Gene_Base::ResetGeneid(), CHG_Gene_Base::ResetLocation(), CHG_Gene_Base::ResetLocus_tag(), CHG_Gene_Base::ResetNuc_acc(), CHG_Gene_Base::ResetNuc_gi(), CHG_Gene_Base::ResetOtherid(), CHG_Gene_Base::ResetProt_acc(), CHG_Gene_Base::ResetProt_gi(), CHG_Gene_Base::ResetProt_len(), CHG_Gene_Base::ResetProt_links(), CHG_Gene_Base::ResetSymbol(), CHG_Gene_Base::ResetTaxid(), and CHG_Gene_Base::ResetTitle().
◆ Reset() [10/13] void CHG_Link_Base::Reset ( void ) virtual ◆ Reset() [11/13] void CHG_Node_Base::Reset ( void ) virtual ◆ Reset() [12/13] ◆ Reset() [13/13] void CHG_Stats_Base::Reset ( void ) virtual ◆ ResetAliases() void CHG_Gene_Base::ResetAliases ( void ) ◆ ResetAlignment() void CHG_Alignment_Base::ResetAlignment ( void ) ◆ ResetBegin() void CHG_Domain_Base::ResetBegin ( void ) inline ◆ ResetBranch_len() void CHG_Node_Base::ResetBranch_len ( void ) inline ◆ ResetCaption() [1/3] void CHG_Commentary_Base::ResetCaption ( void ) ◆ ResetCaption() [2/3] void CHG_Entry_Base::ResetCaption ( void ) ◆ ResetCaption() [3/3] void CHG_Node_Base::ResetCaption ( void ) ◆ ResetCdd_id() void CHG_Domain_Base::ResetCdd_id ( void ) ◆ ResetCdd_name() void CHG_Domain_Base::ResetCdd_name ( void ) ◆ ResetChildren() void CHG_Node_Base::ResetChildren ( void ) ◆ ResetChr() void CHG_Gene_Base::ResetChr ( void ) ◆ ResetCommentaries() [1/2] void CHG_CommentarySet_Base::ResetCommentaries ( void ) ◆ ResetCommentaries() [2/2] void CHG_Entry_Base::ResetCommentaries ( void ) ◆ ResetCr_date() void CHG_Entry_Base::ResetCr_date ( void ) ◆ ResetCurrent_node() void CHG_Node_Base::ResetCurrent_node ( void ) inline ◆ ResetDescription() void CHG_Commentary_Base::ResetDescription ( void ) ◆ ResetDistances() void CHG_Entry_Base::ResetDistances ( void ) ◆ ResetDomains() void CHG_Gene_Base::ResetDomains ( void ) ◆ ResetEnd() void CHG_Domain_Base::ResetEnd ( void ) inline ◆ ResetEntries() void CHG_EntrySet_Base::ResetEntries ( void ) ◆ ResetGene_links() void CHG_Gene_Base::ResetGene_links ( void ) ◆ ResetGeneid() [1/2] void CHG_Commentary_Base::ResetGeneid ( void ) inline ◆ ResetGeneid() [2/2] void CHG_Gene_Base::ResetGeneid ( void ) inline ◆ ResetGenes() void CHG_Entry_Base::ResetGenes ( void ) ◆ ResetGi1() void CHG_Stats_Base::ResetGi1 ( void ) inline ◆ ResetGi2() void CHG_Stats_Base::ResetGi2 ( void ) inline ◆ ResetHg_id() [1/3] void CHG_Alignment_Base::ResetHg_id ( void ) inline ◆ ResetHg_id() [2/3] void CHG_CommentarySet_Base::ResetHg_id ( void ) inline ◆ ResetHg_id() [3/3] void CHG_Entry_Base::ResetHg_id ( void ) inline ◆ ResetHypertext() void CHG_Link_Base::ResetHypertext ( void ) ◆ ResetId() [1/2] ◆ ResetId() [2/2] void CHG_Node_id_Base::ResetId ( void ) inline ◆ ResetId_type() void CHG_Node_id_Base::ResetId_type ( void ) inline ◆ ResetKa() void CHG_Stats_Base::ResetKa ( void ) inline ◆ ResetKnc() void CHG_Stats_Base::ResetKnc ( void ) inline ◆ ResetKnr() void CHG_Stats_Base::ResetKnr ( void ) inline ◆ ResetKs() void CHG_Stats_Base::ResetKs ( void ) inline ◆ ResetLink() void CHG_Commentary_Base::ResetLink ( void ) ◆ ResetLocation() void CHG_Gene_Base::ResetLocation ( void ) ◆ ResetLocus_tag() void CHG_Gene_Base::ResetLocus_tag ( void ) ◆ ResetNode() void CHG_Entry_Base::ResetNode ( void ) ◆ ResetNuc_acc() void CHG_Gene_Base::ResetNuc_acc ( void ) ◆ ResetNuc_change() void CHG_Stats_Base::ResetNuc_change ( void ) inline ◆ ResetNuc_change_jc() void CHG_Stats_Base::ResetNuc_change_jc ( void ) inline ◆ ResetNuc_gi() void CHG_Gene_Base::ResetNuc_gi ( void ) inline ◆ ResetOther_commentaries() void CHG_Commentary_Base::ResetOther_commentaries ( void ) ◆ ResetOther_links() void CHG_Commentary_Base::ResetOther_links ( void ) ◆ ResetOtherid() void CHG_Gene_Base::ResetOtherid ( void ) inline ◆ ResetProt_acc() void CHG_Gene_Base::ResetProt_acc ( void ) ◆ ResetProt_change() void CHG_Stats_Base::ResetProt_change ( void ) inline ◆ ResetProt_gi() void CHG_Gene_Base::ResetProt_gi ( void ) inline ◆ ResetProt_len() void CHG_Gene_Base::ResetProt_len ( void ) inline ◆ ResetProt_links() void CHG_Gene_Base::ResetProt_links ( void ) ◆ ResetProvider() void CHG_Commentary_Base::ResetProvider ( void ) ◆ ResetPssm_id() void CHG_Domain_Base::ResetPssm_id ( void ) inline ◆ ResetRecip_best() void CHG_Stats_Base::ResetRecip_best ( void ) inline ◆ ResetSymbol() void CHG_Gene_Base::ResetSymbol ( void ) ◆ ResetTaxid() [1/3] void CHG_Commentary_Base::ResetTaxid ( void ) inline ◆ ResetTaxid() [2/3] void CHG_Entry_Base::ResetTaxid ( void ) inline ◆ ResetTaxid() [3/3] void CHG_Gene_Base::ResetTaxid ( void ) inline ◆ ResetTitle() [1/3] void CHG_CommentarySet_Base::ResetTitle ( void ) ◆ ResetTitle() [2/3] void CHG_Entry_Base::ResetTitle ( void ) ◆ ResetTitle() [3/3] void CHG_Gene_Base::ResetTitle ( void ) ◆ ResetType() void CHG_Node_Base::ResetType ( void ) inline ◆ ResetUp_date() void CHG_Entry_Base::ResetUp_date ( void ) ◆ ResetUrl() void CHG_Link_Base::ResetUrl ( void ) ◆ ResetVersion() void CHG_Entry_Base::ResetVersion ( void ) inline ◆ ResetWarnings() void CHG_Entry_Base::ResetWarnings ( void ) ◆ Set() [1/2] ◆ Set() [2/2] ◆ SetAliases() ◆ SetAlignment() [1/2] ◆ SetAlignment() [2/2] ◆ SetBegin() [1/2] ◆ SetBegin() [2/2] ◆ SetBranch_len() [1/2] ◆ SetBranch_len() [2/2] ◆ SetCaption() [1/9] ◆ SetCaption() [2/9] ◆ SetCaption() [3/9] ◆ SetCaption() [4/9] ◆ SetCaption() [5/9] ◆ SetCaption() [6/9] ◆ SetCaption() [7/9] ◆ SetCaption() [8/9] ◆ SetCaption() [9/9] ◆ SetCdd_id() [1/3] ◆ SetCdd_id() [2/3] ◆ SetCdd_id() [3/3] ◆ SetCdd_name() [1/3] ◆ SetCdd_name() [2/3] ◆ SetCdd_name() [3/3] ◆ SetChildren() ◆ SetChr() [1/3] void CHG_Gene_Base::SetChr ( const TChr & value ) inline ◆ SetChr() [2/3] ◆ SetChr() [3/3] ◆ SetCommentaries() [1/2] ◆ SetCommentaries() [2/2] ◆ SetCr_date() [1/2] ◆ SetCr_date() [2/2] ◆ SetCurrent_node() [1/2] ◆ SetCurrent_node() [2/2] ◆ SetDefaultCurrent_node() void CHG_Node_Base::SetDefaultCurrent_node ( void ) inline ◆ SetDescription() [1/3] ◆ SetDescription() [2/3] ◆ SetDescription() [3/3] ◆ SetDistances() ◆ SetDomains() ◆ SetEnd() [1/2] ◆ SetEnd() [2/2] ◆ SetEntries() ◆ SetGene_links() ◆ SetGeneid() [1/4] ◆ SetGeneid() [2/4] ◆ SetGeneid() [3/4] ◆ SetGeneid() [4/4] ◆ SetGenes() ◆ SetGi1() [1/2] ◆ SetGi1() [2/2] ◆ SetGi2() [1/2] ◆ SetGi2() [2/2] ◆ SetHg_id() [1/6] ◆ SetHg_id() [2/6] ◆ SetHg_id() [3/6] ◆ SetHg_id() [4/6] ◆ SetHg_id() [5/6] ◆ SetHg_id() [6/6] ◆ SetHypertext() [1/3] ◆ SetHypertext() [2/3] ◆ SetHypertext() [3/3] ◆ SetId() [1/4] ◆ SetId() [2/4] ◆ SetId() [3/4] ◆ SetId() [4/4] ◆ SetId_type() [1/2] ◆ SetId_type() [2/2] ◆ SetKa() [1/2] ◆ SetKa() [2/2] ◆ SetKnc() [1/2] ◆ SetKnc() [2/2] ◆ SetKnr() [1/2] ◆ SetKnr() [2/2] ◆ SetKs() [1/2] ◆ SetKs() [2/2] ◆ SetLink() [1/2] ◆ SetLink() [2/2] ◆ SetLocation() [1/2] ◆ SetLocation() [2/2] ◆ SetLocus_tag() [1/3] ◆ SetLocus_tag() [2/3] ◆ SetLocus_tag() [3/3] ◆ SetNode() [1/2] ◆ SetNode() [2/2] ◆ SetNuc_acc() [1/3] ◆ SetNuc_acc() [2/3] ◆ SetNuc_acc() [3/3] ◆ SetNuc_change() [1/2] ◆ SetNuc_change() [2/2] ◆ SetNuc_change_jc() [1/2] ◆ SetNuc_change_jc() [2/2] ◆ SetNuc_gi() [1/2] ◆ SetNuc_gi() [2/2] ◆ SetOther_commentaries() ◆ SetOther_links() ◆ SetOtherid() [1/2] ◆ SetOtherid() [2/2] ◆ SetProt_acc() [1/3] ◆ SetProt_acc() [2/3] ◆ SetProt_acc() [3/3] ◆ SetProt_change() [1/2] ◆ SetProt_change() [2/2] ◆ SetProt_gi() [1/2] ◆ SetProt_gi() [2/2] ◆ SetProt_len() [1/2] ◆ SetProt_len() [2/2] ◆ SetProt_links() ◆ SetProvider() [1/3] ◆ SetProvider() [2/3] ◆ SetProvider() [3/3] ◆ SetPssm_id() [1/2] ◆ SetPssm_id() [2/2] ◆ SetRecip_best() [1/2] ◆ SetRecip_best() [2/2] ◆ SetSymbol() [1/3] ◆ SetSymbol() [2/3] ◆ SetSymbol() [3/3] ◆ SetTaxid() [1/6] ◆ SetTaxid() [2/6] ◆ SetTaxid() [3/6] ◆ SetTaxid() [4/6] ◆ SetTaxid() [5/6] ◆ SetTaxid() [6/6] ◆ SetTitle() [1/9] void CHG_CommentarySet_Base::SetTitle ( const TTitle & value ) inline ◆ SetTitle() [2/9] ◆ SetTitle() [3/9] ◆ SetTitle() [4/9] ◆ SetTitle() [5/9] ◆ SetTitle() [6/9] ◆ SetTitle() [7/9] ◆ SetTitle() [8/9] ◆ SetTitle() [9/9] ◆ SetType() [1/2] ◆ SetType() [2/2] ◆ SetUp_date() [1/2] ◆ SetUp_date() [2/2] ◆ SetUrl() [1/3] void CHG_Link_Base::SetUrl ( const TUrl & value ) inline ◆ SetUrl() [2/3] ◆ SetUrl() [3/3] ◆ SetVersion() [1/2] ◆ SetVersion() [2/2] ◆ SetWarnings() ◆ ~CHG_Alignment() ◆ ~CHG_Alignment_Base() CHG_Alignment_Base::~CHG_Alignment_Base ( void ) virtualDefinition at line 93 of file HG_Alignment_.cpp.
◆ ~CHG_AlignmentSet() ◆ ~CHG_AlignmentSet_Base() CHG_AlignmentSet_Base::~CHG_AlignmentSet_Base ( void ) virtualDefinition at line 74 of file HG_AlignmentSet_.cpp.
◆ ~CHG_Commentary() ◆ ~CHG_Commentary_Base() CHG_Commentary_Base::~CHG_Commentary_Base ( void ) virtualDefinition at line 135 of file HG_Commentary_.cpp.
◆ ~CHG_CommentaryContainer() ◆ ~CHG_CommentaryContainer_Base() ◆ ~CHG_CommentarySet() ◆ ~CHG_CommentarySet_Base() CHG_CommentarySet_Base::~CHG_CommentarySet_Base ( void ) virtualDefinition at line 90 of file HG_CommentarySet_.cpp.
◆ ~CHG_Domain() CHG_Domain::~CHG_Domain ( void )Definition at line 50 of file HG_Domain.cpp.
◆ ~CHG_Domain_Base() CHG_Domain_Base::~CHG_Domain_Base ( void ) virtualDefinition at line 93 of file HG_Domain_.cpp.
◆ ~CHG_Entry_Base() CHG_Entry_Base::~CHG_Entry_Base ( void ) virtualDefinition at line 187 of file HG_Entry_.cpp.
◆ ~CHG_EntrySet() ◆ ~CHG_EntrySet_Base() CHG_EntrySet_Base::~CHG_EntrySet_Base ( void ) virtualDefinition at line 79 of file HG_EntrySet_.cpp.
◆ ~CHG_Gene_Base() CHG_Gene_Base::~CHG_Gene_Base ( void ) virtualDefinition at line 185 of file HG_Gene_.cpp.
◆ ~CHG_Link() CHG_Link::~CHG_Link ( void )Definition at line 50 of file HG_Link.cpp.
◆ ~CHG_Link_Base() CHG_Link_Base::~CHG_Link_Base ( void ) virtualDefinition at line 86 of file HG_Link_.cpp.
◆ ~CHG_Node() CHG_Node::~CHG_Node ( void )Definition at line 50 of file HG_Node.cpp.
◆ ~CHG_Node_Base() CHG_Node_Base::~CHG_Node_Base ( void ) virtualDefinition at line 124 of file HG_Node_.cpp.
◆ ~CHG_Node_id() CHG_Node_id::~CHG_Node_id ( void )Definition at line 50 of file HG_Node_id.cpp.
◆ ~CHG_Node_id_Base() CHG_Node_id_Base::~CHG_Node_id_Base ( void ) virtualDefinition at line 85 of file HG_Node_id_.cpp.
◆ ~CHG_Stats() CHG_Stats::~CHG_Stats ( void )Definition at line 50 of file HG_Stats.cpp.
◆ ~CHG_Stats_Base() CHG_Stats_Base::~CHG_Stats_Base ( void ) virtualDefinition at line 91 of file HG_Stats_.cpp.
◆ m_Aliases list< string > CHG_Gene_Base::m_Aliases private ◆ m_Alignment ◆ m_Begin int CHG_Domain_Base::m_Begin private ◆ m_Branch_len int CHG_Node_Base::m_Branch_len private ◆ m_Caption [1/3] string CHG_Commentary_Base::m_Caption private ◆ m_Caption [2/3] string CHG_Entry_Base::m_Caption private ◆ m_Caption [3/3] string CHG_Node_Base::m_Caption private ◆ m_Cdd_id string CHG_Domain_Base::m_Cdd_id private ◆ m_Cdd_name string CHG_Domain_Base::m_Cdd_name private ◆ m_Children ◆ m_Chr ◆ m_Commentaries [1/2] ◆ m_Commentaries [2/2] ◆ m_Cr_date ◆ m_Current_node bool CHG_Node_Base::m_Current_node private ◆ m_data [1/2] ◆ m_data [2/2] ◆ m_Description string CHG_Commentary_Base::m_Description private ◆ m_Distances ◆ m_Domains ◆ m_End int CHG_Domain_Base::m_End private ◆ m_Entries ◆ m_Gene_links ◆ m_Geneid [1/2] int CHG_Commentary_Base::m_Geneid private ◆ m_Geneid [2/2] int CHG_Gene_Base::m_Geneid private ◆ m_Genes ◆ m_Gi1 int CHG_Stats_Base::m_Gi1 private ◆ m_Gi2 int CHG_Stats_Base::m_Gi2 private ◆ m_Hg_id [1/3] int CHG_Alignment_Base::m_Hg_id private ◆ m_Hg_id [2/3] int CHG_CommentarySet_Base::m_Hg_id private ◆ m_Hg_id [3/3] int CHG_Entry_Base::m_Hg_id private ◆ m_Hypertext string CHG_Link_Base::m_Hypertext private ◆ m_Id [1/2] ◆ m_Id [2/2] int CHG_Node_id_Base::m_Id private ◆ m_Id_type ◆ m_Ka double CHG_Stats_Base::m_Ka private ◆ m_Knc double CHG_Stats_Base::m_Knc private ◆ m_Knr double CHG_Stats_Base::m_Knr private ◆ m_Ks double CHG_Stats_Base::m_Ks private ◆ m_Link ◆ m_Location ◆ m_Locus_tag string CHG_Gene_Base::m_Locus_tag private ◆ m_Node ◆ m_Nuc_acc string CHG_Gene_Base::m_Nuc_acc private ◆ m_Nuc_change double CHG_Stats_Base::m_Nuc_change private ◆ m_Nuc_change_jc double CHG_Stats_Base::m_Nuc_change_jc private ◆ m_Nuc_gi int CHG_Gene_Base::m_Nuc_gi private ◆ m_Other_commentaries ◆ m_Other_links ◆ m_Otherid int CHG_Gene_Base::m_Otherid private ◆ m_Prot_acc string CHG_Gene_Base::m_Prot_acc private ◆ m_Prot_change double CHG_Stats_Base::m_Prot_change private ◆ m_Prot_gi int CHG_Gene_Base::m_Prot_gi private ◆ m_Prot_len int CHG_Gene_Base::m_Prot_len private ◆ m_Prot_links ◆ m_Provider string CHG_Commentary_Base::m_Provider private ◆ m_Pssm_id int CHG_Domain_Base::m_Pssm_id private ◆ m_Recip_best bool CHG_Stats_Base::m_Recip_best private ◆ m_set_State [1/13] Uint4 CHG_Alignment_Base::m_set_State[1] private ◆ m_set_State [2/13] Uint4 CHG_AlignmentSet_Base::m_set_State[1] private ◆ m_set_State [3/13] Uint4 CHG_Commentary_Base::m_set_State[1] privateDefinition at line 416 of file HG_Commentary_.hpp.
Referenced by CHG_Commentary_Base::CHG_Commentary_Base(), CHG_Commentary_Base::IsSetCaption(), CHG_Commentary_Base::IsSetDescription(), CHG_Commentary_Base::IsSetGeneid(), CHG_Commentary_Base::IsSetOther_commentaries(), CHG_Commentary_Base::IsSetOther_links(), CHG_Commentary_Base::IsSetProvider(), CHG_Commentary_Base::IsSetTaxid(), CHG_Commentary_Base::ResetCaption(), CHG_Commentary_Base::ResetDescription(), CHG_Commentary_Base::ResetGeneid(), CHG_Commentary_Base::ResetOther_commentaries(), CHG_Commentary_Base::ResetOther_links(), CHG_Commentary_Base::ResetProvider(), CHG_Commentary_Base::ResetTaxid(), CHG_Commentary_Base::SetCaption(), CHG_Commentary_Base::SetDescription(), CHG_Commentary_Base::SetGeneid(), CHG_Commentary_Base::SetOther_commentaries(), CHG_Commentary_Base::SetOther_links(), CHG_Commentary_Base::SetProvider(), and CHG_Commentary_Base::SetTaxid().
◆ m_set_State [4/13] Uint4 CHG_CommentaryContainer_Base::m_set_State[1] private ◆ m_set_State [5/13] Uint4 CHG_CommentarySet_Base::m_set_State[1] private ◆ m_set_State [6/13] Uint4 CHG_Domain_Base::m_set_State[1] privateDefinition at line 303 of file HG_Domain_.hpp.
Referenced by CHG_Domain_Base::CHG_Domain_Base(), CHG_Domain_Base::IsSetBegin(), CHG_Domain_Base::IsSetCdd_id(), CHG_Domain_Base::IsSetCdd_name(), CHG_Domain_Base::IsSetEnd(), CHG_Domain_Base::IsSetPssm_id(), CHG_Domain_Base::ResetBegin(), CHG_Domain_Base::ResetCdd_id(), CHG_Domain_Base::ResetCdd_name(), CHG_Domain_Base::ResetEnd(), CHG_Domain_Base::ResetPssm_id(), CHG_Domain_Base::SetBegin(), CHG_Domain_Base::SetCdd_id(), CHG_Domain_Base::SetCdd_name(), CHG_Domain_Base::SetEnd(), and CHG_Domain_Base::SetPssm_id().
◆ m_set_State [7/13] Uint4 CHG_Entry_Base::m_set_State[1] privateDefinition at line 560 of file HG_Entry_.hpp.
Referenced by CHG_Entry_Base::CHG_Entry_Base(), CHG_Entry_Base::IsSetCaption(), CHG_Entry_Base::IsSetCommentaries(), CHG_Entry_Base::IsSetDistances(), CHG_Entry_Base::IsSetGenes(), CHG_Entry_Base::IsSetHg_id(), CHG_Entry_Base::IsSetTaxid(), CHG_Entry_Base::IsSetTitle(), CHG_Entry_Base::IsSetVersion(), CHG_Entry_Base::IsSetWarnings(), CHG_Entry_Base::ResetCaption(), CHG_Entry_Base::ResetCommentaries(), CHG_Entry_Base::ResetDistances(), CHG_Entry_Base::ResetGenes(), CHG_Entry_Base::ResetHg_id(), CHG_Entry_Base::ResetTaxid(), CHG_Entry_Base::ResetTitle(), CHG_Entry_Base::ResetVersion(), CHG_Entry_Base::ResetWarnings(), CHG_Entry_Base::SetCaption(), CHG_Entry_Base::SetCommentaries(), CHG_Entry_Base::SetDistances(), CHG_Entry_Base::SetGenes(), CHG_Entry_Base::SetHg_id(), CHG_Entry_Base::SetTaxid(), CHG_Entry_Base::SetTitle(), CHG_Entry_Base::SetVersion(), and CHG_Entry_Base::SetWarnings().
◆ m_set_State [8/13] Uint4 CHG_EntrySet_Base::m_set_State[1] private ◆ m_set_State [9/13] Uint4 CHG_Link_Base::m_set_State[1] private ◆ m_set_State [10/13] Uint4 CHG_Node_Base::m_set_State[1] privateDefinition at line 353 of file HG_Node_.hpp.
Referenced by CHG_Node_Base::CHG_Node_Base(), CHG_Node_Base::IsSetBranch_len(), CHG_Node_Base::IsSetCaption(), CHG_Node_Base::IsSetChildren(), CHG_Node_Base::IsSetCurrent_node(), CHG_Node_Base::IsSetType(), CHG_Node_Base::ResetBranch_len(), CHG_Node_Base::ResetCaption(), CHG_Node_Base::ResetChildren(), CHG_Node_Base::ResetCurrent_node(), CHG_Node_Base::ResetType(), CHG_Node_Base::SetBranch_len(), CHG_Node_Base::SetCaption(), CHG_Node_Base::SetChildren(), CHG_Node_Base::SetCurrent_node(), and CHG_Node_Base::SetType().
◆ m_set_State [11/13] Uint4 CHG_Node_id_Base::m_set_State[1] private ◆ m_set_State [12/13] Uint4 CHG_Stats_Base::m_set_State[1] privateDefinition at line 491 of file HG_Stats_.hpp.
Referenced by CHG_Stats_Base::CHG_Stats_Base(), CHG_Stats_Base::IsSetGi1(), CHG_Stats_Base::IsSetGi2(), CHG_Stats_Base::IsSetKa(), CHG_Stats_Base::IsSetKnc(), CHG_Stats_Base::IsSetKnr(), CHG_Stats_Base::IsSetKs(), CHG_Stats_Base::IsSetNuc_change(), CHG_Stats_Base::IsSetNuc_change_jc(), CHG_Stats_Base::IsSetProt_change(), CHG_Stats_Base::IsSetRecip_best(), CHG_Stats_Base::ResetGi1(), CHG_Stats_Base::ResetGi2(), CHG_Stats_Base::ResetKa(), CHG_Stats_Base::ResetKnc(), CHG_Stats_Base::ResetKnr(), CHG_Stats_Base::ResetKs(), CHG_Stats_Base::ResetNuc_change(), CHG_Stats_Base::ResetNuc_change_jc(), CHG_Stats_Base::ResetProt_change(), CHG_Stats_Base::ResetRecip_best(), CHG_Stats_Base::SetGi1(), CHG_Stats_Base::SetGi2(), CHG_Stats_Base::SetKa(), CHG_Stats_Base::SetKnc(), CHG_Stats_Base::SetKnr(), CHG_Stats_Base::SetKs(), CHG_Stats_Base::SetNuc_change(), CHG_Stats_Base::SetNuc_change_jc(), CHG_Stats_Base::SetProt_change(), and CHG_Stats_Base::SetRecip_best().
◆ m_set_State [13/13] Uint4 CHG_Gene_Base::m_set_State[2] privateDefinition at line 760 of file HG_Gene_.hpp.
Referenced by CHG_Gene_Base::CHG_Gene_Base(), CHG_Gene_Base::IsSetAliases(), CHG_Gene_Base::IsSetChr(), CHG_Gene_Base::IsSetDomains(), CHG_Gene_Base::IsSetGene_links(), CHG_Gene_Base::IsSetGeneid(), CHG_Gene_Base::IsSetLocus_tag(), CHG_Gene_Base::IsSetNuc_acc(), CHG_Gene_Base::IsSetNuc_gi(), CHG_Gene_Base::IsSetOtherid(), CHG_Gene_Base::IsSetProt_acc(), CHG_Gene_Base::IsSetProt_gi(), CHG_Gene_Base::IsSetProt_len(), CHG_Gene_Base::IsSetProt_links(), CHG_Gene_Base::IsSetSymbol(), CHG_Gene_Base::IsSetTaxid(), CHG_Gene_Base::IsSetTitle(), CHG_Gene_Base::ResetAliases(), CHG_Gene_Base::ResetChr(), CHG_Gene_Base::ResetDomains(), CHG_Gene_Base::ResetGene_links(), CHG_Gene_Base::ResetGeneid(), CHG_Gene_Base::ResetLocus_tag(), CHG_Gene_Base::ResetNuc_acc(), CHG_Gene_Base::ResetNuc_gi(), CHG_Gene_Base::ResetOtherid(), CHG_Gene_Base::ResetProt_acc(), CHG_Gene_Base::ResetProt_gi(), CHG_Gene_Base::ResetProt_len(), CHG_Gene_Base::ResetProt_links(), CHG_Gene_Base::ResetSymbol(), CHG_Gene_Base::ResetTaxid(), CHG_Gene_Base::ResetTitle(), CHG_Gene_Base::SetAliases(), CHG_Gene_Base::SetChr(), CHG_Gene_Base::SetDomains(), CHG_Gene_Base::SetGene_links(), CHG_Gene_Base::SetGeneid(), CHG_Gene_Base::SetLocus_tag(), CHG_Gene_Base::SetNuc_acc(), CHG_Gene_Base::SetNuc_gi(), CHG_Gene_Base::SetOtherid(), CHG_Gene_Base::SetProt_acc(), CHG_Gene_Base::SetProt_gi(), CHG_Gene_Base::SetProt_len(), CHG_Gene_Base::SetProt_links(), CHG_Gene_Base::SetSymbol(), CHG_Gene_Base::SetTaxid(), and CHG_Gene_Base::SetTitle().
◆ m_Symbol string CHG_Gene_Base::m_Symbol private ◆ m_Taxid [1/3] int CHG_Commentary_Base::m_Taxid private ◆ m_Taxid [2/3] int CHG_Entry_Base::m_Taxid private ◆ m_Taxid [3/3] int CHG_Gene_Base::m_Taxid private ◆ m_Title [1/3] string CHG_CommentarySet_Base::m_Title private ◆ m_Title [2/3] string CHG_Entry_Base::m_Title private ◆ m_Title [3/3] ◆ m_Type EType CHG_Node_Base::m_Type private ◆ m_Up_date ◆ m_Url ◆ m_Version int CHG_Entry_Base::m_Version private ◆ m_Warnings list< string > CHG_Entry_Base::m_Warnings privateRetroSearch is an open source project built by @garambo | Open a GitHub Issue
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