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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/glb__align_8cpp.html below:

NCBI C++ ToolKit: src/algo/gnomon/glb_align.cpp File Reference

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CCigar  GlbAlign (const char *a, int na, const char *b, int nb, int rho, int sigma, const char delta[256][256])   CCigar  LclAlign (const char *a, int na, const char *b, int nb, int rho, int sigma, const char delta[256][256])   CCigar  LclAlign (const char *a, int na, const char *b, int nb, int rho, int sigma, bool pinleft, bool pinright, const char delta[256][256])   CCigar  VariBandAlign (const char *a, int na, const char *b, int nb, int rho, int sigma, const char delta[256][256], const TSignedSeqRange *blimits)   double  Entropy (const string &seq)   ◆ Entropy() ◆ GlbAlign() ◆ LclAlign() [1/2] ◆ LclAlign() [2/2] ◆ VariBandAlign()

Definition at line 672 of file glb_align.cpp.

References a, b, delta(), CRange_Base::GetFrom(), CRange_Base::GetTo(), i, int, last(), len, next(), CCigar::PushFront(), and swap().


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