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NCBI C++ ToolKit: src/objtools/import/ftable/gff_util.cpp Source File

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46  const

vector<string>& gffColumns,

47  bool

& scoreIsPresent,

51  auto

score = gffColumns[5];

53

scoreIsPresent =

false

;

60  catch

(std::exception&) {

63

scoreIsPresent =

true

;

70  const

vector<string>& gffColumns,

74

phase = gffColumns[7];

75

vector<string> valid = {

"."

,

"0"

,

"1"

,

"2"

};

76  auto

validIt = find(valid.begin(), valid.end(), phase);

77  return

(validIt != valid.end());

86

vector<CCdregion::TFrame> frameValues = {

93  return

frameValues[phase[0] -

'0'

];

static bool InitializeFrame(const std::vector< std::string > &, std::string &)

static CCdregion::TFrame PhaseToFrame(const std::string &)

static bool InitializeScore(const std::vector< std::string > &, bool &, double &)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

static double StringToDouble(const CTempStringEx str, TStringToNumFlags flags=0)

Convert string to double.

@ eFrame_not_set

not set, code uses one

@ eFrame_three

reading frame

Defines classes: CDirEntry, CFile, CDir, CSymLink, CMemoryFile, CFileUtil, CFileLock,...

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