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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/getfeature_8cpp_source.html below:

NCBI C++ ToolKit: src/objtools/readers/getfeature.cpp Source File

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41

m_FeatFile =

new CNcbiIfstream

(feat_file.c_str(), IOS_BASE::binary);

42

m_FeatFileIndex =

new CNcbiIfstream

(index_file.c_str(), IOS_BASE::binary);

43

m_5FeatInfo =

nullptr

;

44

m_3FeatInfo =

nullptr

;

71  if

(offset_info.

id

== id_str){

89  if

(id_str != feat_info->

id

) {

100  if

(feat_info->

range

< seq_range ){

CNcbiIfstream * m_FeatFileIndex

Tfeatinfo & GetFeatInfo(const string &id_str, const CRange< TSeqPos > &seq_range, SFeatInfo *&feat5, SFeatInfo *&feat3, int max_feature=3)

vector< SFeatInfo * > m_FeatInfoList

CNcbiIfstream * m_FeatFile

map< string, unsigned int > m_OffsetMap

const_iterator end() const

iterator_bool insert(const value_type &val)

const_iterator find(const key_type &key) const

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

bool IntersectingWith(const TThisType &r) const

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

IO_PREFIX::ifstream CNcbiIfstream

Portable alias for ifstream.

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