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50 const CGene_ref* gene = feat.GetGeneXref();
bool IsSuppressed(void) const
namespace ncbi::objects::
CSeq_feat_Handle GetGeneWithLocus(const string &locus, bool tag) const
Find genes by locus, locus tag, or Gene-ref.
Include a standard set of the NCBI C++ Toolkit most basic headers.
CMappedFeat GetBestOverlappingFeat(const CMappedFeat &feat, CSeqFeatData::ESubtype need_subtype, sequence::EOverlapType overlap_type, CFeatTree *feat_tree=0, const SAnnotSelector *base_sel=0)
@ eOverlap_Contained
2nd contained within 1st extremes
CBioseq_Handle GetBioseqFromSeqLoc(const CSeq_loc &loc, CScope &scope, CScope::EGetBioseqFlag flag=CScope::eGetBioseq_Loaded)
Retrieve the Bioseq Handle from a location.
CConstRef< CSeq_feat > GetGeneForFeature(const CSeq_feat &feat, CScope &scope)
Finds gene for feature, but obeys SeqFeatXref directives.
const CTSE_Handle & GetTSE_Handle(void) const
Get CTSE_Handle of containing TSE.
CConstRef< CSeq_feat > GetOriginalSeq_feat(void) const
#define END_NCBI_SCOPE
End previously defined NCBI scope.
#define END_SCOPE(ns)
End the previously defined scope.
#define BEGIN_NCBI_SCOPE
Define ncbi namespace.
#define BEGIN_SCOPE(ns)
Define a new scope.
bool CanGetLocus(void) const
Check if it is safe to call GetLocus method.
bool CanGetLocus_tag(void) const
Check if it is safe to call GetLocus_tag method.
const TLocus_tag & GetLocus_tag(void) const
Get the Locus_tag member data.
const TLocus & GetLocus(void) const
Get the Locus member data.
Portable reference counted smart and weak pointers using CWeakRef, CRef, CObject and CObjectEx.
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