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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/gene__feats__from__xrefs_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/packages/pkg_sequence_edit/gene_feats_from_xrefs.cpp Source File

answer = wxMessageBox(

(

),

(

), wxYES_NO | wxICON_QUESTION);

remove_xref = (answer == wxYES);

(

feat_ci(seh); feat_ci; ++feat_ci)

modified =

;

((*xref)->IsSetData() && (*xref)->GetData().IsGene())

->Assign((*xref)->GetData());

(

.IsSetPseudo() &&

.GetPseudo())

(

feat_ci(seh); feat_ci; ++feat_ci)

@ eExtreme_Biological

5' and 3'

static CRef< CCmdComposite > GetCommand(CSeq_entry_Handle seh)

static CRef< CCmdComposite > GetCommand(CSeq_entry_Handle seh)

namespace ncbi::objects::

void SetGeneXref(CGene_ref &value)

USING_SCOPE(ncbi::objects)

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Set object to copy of another one.

bool IsPartialStart(ESeqLocExtremes ext) const

check start or stop of location for e_Lim fuzz

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Override Assign() to incorporate cache invalidation.

bool IsPartialStop(ESeqLocExtremes ext) const

CMappedFeat GetBestGeneForFeat(const CMappedFeat &feat, CFeatTree *feat_tree=0, const SAnnotSelector *base_sel=0, CFeatTree::EBestGeneType lookup_type=CFeatTree::eBestGene_TreeOnly)

CBioseq_Handle GetBioseqHandle(const CSeq_id &id)

Get bioseq handle by seq-id.

CSeq_entry_Handle GetSeq_entry_Handle(void) const

Get parent Seq-entry handle.

CScope & GetScope(void) const

Get scope this handle belongs to.

CSeqFeatData::ESubtype GetFeatSubtype(void) const

const CSeq_feat & GetMappedFeature(void) const

Feature mapped to the master sequence.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

bool IsSetData(void) const

the specific data Check if a value has been assigned to Data data member.

void SetLocation(TLocation &value)

Assign a value to Location data member.

void SetPartial(TPartial value)

Assign a value to Partial data member.

bool IsSetXref(void) const

cite other relevant features Check if a value has been assigned to Xref data member.

bool IsGene(void) const

Check if variant Gene is selected.

const TData & GetData(void) const

Get the Data member data.

void SetData(TData &value)

Assign a value to Data data member.

void SetPseudo(TPseudo value)

Assign a value to Pseudo data member.

const TGene & GetGene(void) const

Get the variant data.

const TXref & GetXref(void) const

Get the Xref member data.

void ResetXref(void)

Reset Xref data member.

where boath are integers</td > n< td ></td > n</tr > n< tr > n< td > tse</td > n< td > optional</td > n< td > String</td > n< td class=\"description\"> TSE option controls what blob is orig

Utility macros and typedefs for exploring NCBI objects from seqfeat.asn.

#define ERASE_SEQFEATXREF_ON_SEQFEAT(Itr, Var)

ERASE_SEQFEATXREF_ON_SEQFEAT.

#define EDIT_EACH_SEQFEATXREF_ON_SEQFEAT(Itr, Var)

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