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NCBI C++ ToolKit: src/algo/blast/core/gencode_singleton.c Source File

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59

node.

gc_id

= gen_code_id;

SDynamicSGenCodeNodeArray * DynamicSGenCodeNodeArrayFree(SDynamicSGenCodeNodeArray *arr)

Deallocates a dynamic array structure.

Int2 DynamicSGenCodeNodeArray_Append(SDynamicSGenCodeNodeArray *arr, SGenCodeNode element)

Append a SGenCodeNode to the dynamic array structure.

SDynamicSGenCodeNodeArray * DynamicSGenCodeNodeArrayNew()

Allocate a dynamic array of SGenCodeNode with the initial size of INIT_NUM_ELEMENTS.

Uint1 * DynamicSGenCodeNodeArray_Find(const SDynamicSGenCodeNodeArray *arr, Uint4 gen_code_id)

Searches the dynamic array for any element that matches the requested genetic code id.

Declarations for various dynamic array types.

Int2 GenCodeSingletonAdd(Uint4 gen_code_id, const Uint1 *gen_code_str)

Add a genetic code entry to the singleton.

void GenCodeSingletonFini()

Uninitialize the genetic code singleton.

Uint1 * GenCodeSingletonFind(Uint4 gen_code_id)

Returns the genetic code string for the requested genetic code id.

void GenCodeSingletonInit()

Initialize the genetic code singleton.

static SDynamicSGenCodeNodeArray * g_theInstance

The singleton instance.

Defines the interface to interact with the genetic code singleton object.

uint8_t Uint1

1-byte (8-bit) unsigned integer

int16_t Int2

2-byte (16-bit) signed integer

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define ASSERT

macro for assert.

Data structure to maintain a dynamically allocated array of SGenCodeNode.

Elements of the SDynamicSGenCodeNodeArray dynamic array.

Uint1 * gc_str

Genetic code string.

Uint4 gc_id

Genetic code id.


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