Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/gbproject__tool_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/app/project_tools/gbproject_tool.cpp Source File

unique_ptr<CProjectFileWriter>

;

(CGBProjectHandle& project,

& args,

& in_folder);

arg_desc->SetUsageContext(

().GetProgramBasename(),

);

arg_desc->AddOptionalKey(

,

,

,

arg_desc->AddOptionalKey(

,

,

,

arg_desc->AddFlag(

,

);

arg_desc->AddFlag(

,

);

arg_desc->AddFlag(

,

);

arg_desc->AddOptionalKey(

,

,

arg_desc->AddOptionalKey(

,

,

arg_desc->AddDefaultKey(

,

,

arg_desc->SetConstraint(

,

arg_desc->AddOptionalKey(

,

,

,

arg_desc->AddOptionalKey(

,

,

arg_desc->AddOptionalKey(

,

,

arg_desc->SetConstraint(

, &(*

,

,

,

));

arg_desc->AddOptionalKey(

,

,

arg_desc->AddOptionalKey(

,

,

arg_desc->AddOptionalKey(

,

,

,

arg_desc->AddOptionalKey(

,

,

,

arg_desc->AddOptionalKey(

,

,

,

kSpacer(level * 2,

);

currentDir(currentName);

currentDir = parentDir;

<<

<<

<< currentName << endl;

cout << kSpacer <<

<<

<< (*iter)->GetId() <<

<< itemTitle <<

<< itemFilename << endl;

->WriteFile(itemFilename,

->GetTimeT(&mod_a);

->GetTimeT(&mod_b);

(mod_a < mod_b);

query_label, subject_label;

query_label +

+ subject_label;

vector<CDirEntry*> children_vec;

(

& child : children) {

children_vec.push_back(new_dir);

CurrLabel = (*childIter)->GetName();

( (*childIter)->IsLink() ) {

(*childIter)->DereferenceLink();

( (*childIter)->IsDir() ) {

childFolder->

().SetTitle(CurrLabel);

cout <<

<< CurrLabel << endl;

childDir(**childIter);

( (*childIter)->IsFile() ) {

cout <<

<< CurrLabel << endl;

= CurrLabel;

((*desciter)->IsName()) {

}

((*desciter)->IsTitle()) {

= title->GetTitle();

= name->GetName();

(*childIter)->GetTime(&CreateTime);

cout <<

<<

<< endl;

*childIter =

;

project.AddItem(*it->second, folder);

& folder_name,

( (*iter)->GetInfo().GetTitle() == folder_name) {

folder->

().SetTitle(folder_name);

parent_folder.

().push_back(folder);

EnableID =

;

(args[

].

() && args[

].AsBoolean())

(args[

]) {

(args[

].

()) {

(args[

]) {

(args[

].

()) {

(args[

].

()) {

(args[

].

()) {

(args[

].

()) {

(args[

].

()) {

CGBProjectHandle project(projObj);

descr.

(args[

].AsString());

.SetInfo().SetTitle(

);

.SetInfo().SetCreate_date().SetToTime(create_time);

project.Save(ostr, fmt);

CGBProjectHandle project;

(!project.Load(istr, 0)) {

folder_name = args[

].AsString();

folder->

().SetTitle(folder_name);

project.Save(ostr, fmt);

kSpacer(level * 2,

);

ostr << kSpacer <<

<<

<< (*iter)->GetId() <<

<< s << endl;

CGBProjectHandle project;

(!project.Load(istr, 0)) {

CGBProjectHandle project;

(!project.Load(istr, 0)) {

(args[

].

()) {

folder = args[

].AsString();

project.Save(ostr, fmt);

& fmt_str = args[

].AsString();

track_name = (args[

]) ? args[

].AsString() :

;

(fmt_str ==

) {

(fmt_str ==

) {

(fmt_str ==

) {

(!in_folder.empty()) {

folder_found =

;

((*iter)->GetInfo().GetTitle() == in_folder) {

project.AddItem(*item, **iter);

folder_found =

;

folder->

().SetTitle(in_folder);

project.AddItem(*item, *folder);

project.AddItem(*item, project.SetData());

(!annots.empty()) {

& filename,

& track_name)

(!instr.is_open() || !instr.good()) {

obj_type = os->ReadFileHeader();

(obj_type ==

) {

(!track_name.empty()) {

(obj_type ==

) {

(obj_type ==

) {

(obj_type ==

) {

(

& obj_it :

) {

type_info = obj_it->GetThisTypeInfo();

(type_info->GetName() !=

) {

->SetData().SetAlign().push_back(align);

(

->IsSetData() && !

->GetData().GetAlign().empty()) {

name =

.GetName();

(!track_name.empty()) {

->SetNameDesc(track_name);

->SetNameDesc(name);

->SetTitleDesc(name);

(!project.Load(istr, 0)) {

parent(args[

].AsString());

(args[

].

()) {

ProjFolder = args[

].AsString();

project.SetDescr().SetTitle(parent.

());

project.SetDescr().SetTitle(args[

].AsString());

project.Save(ostr, fmt);

CGBProjectHandle project;

(!project.Load(istr, 0)) {

formatstr = args[

].AsString();

(formatstr ==

)

(formatstr ==

)

(formatstr ==

)

(formatstr ==

)

parent(args[

].AsString());

&

)

);

CGBProjectHandle project;

(!project.Load(istr, 0)) {

= args[

].AsString();

project.Save(ostr, fmt);

&

)

((*iter)->GetInfo().GetTitle() ==

)

CGBProjectHandle project;

(!project.Load(istr, 0)) {

= args[

].AsString();

project.Save(ostr, fmt);

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

void NCBI_SeqTable_RegisterModuleClasses(void)

void NCBI_Sequence_RegisterModuleClasses(void)

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

CTime AsCTime(CTime::ETimeZone tz=CTime::eLocal) const

list< CRef< CSerialObject > > TSerialObjectList

static void LoadFile(const string &Filename, TSerialObjectList &Objects, EFormat Format=CFormatGuess::eUnknown)

EFormat

The formats are checked in the same order as declared here.

@ eBinaryASN

Binary ASN.1.

@ eGtf

New GTF, CGtfReader.

static string GetLoaderNameFromArgs(CReader *reader=0)

static TRegisterLoaderInfo RegisterInObjectManager(CObjectManager &om, CReader *reader=0, CObjectManager::EIsDefault is_default=CObjectManager::eDefault, CObjectManager::TPriority priority=CObjectManager::kPriority_NotSet)

void ReadSeqAnnots(TAnnotList &, CNcbiIstream &, ILineErrorListener *=nullptr) override

Read all objects from given insput stream, returning them as a vector of Seq-annots.

void SetCreateDate(const CTime &time)

SetCreateDate() will add a descriptor for creation date, and insure that only one such descriptor exi...

void SetObject(CSerialObject &object)

wrapper for setting the object pointed to by this item

const CSeq_id & GetSeq_id(TDim row) const

Get seq-id (the first one if segments have different ids).

void SetNameDesc(const string &name)

void SetTitleDesc(const string &title)

virtual const CArgs & GetArgs(void) const

Get parsed command line arguments.

int AppMain(int argc, const char *const *argv, const char *const *envp=0, EAppDiagStream diag=eDS_Default, const char *conf=NcbiEmptyCStr, const string &name=NcbiEmptyString)

Main function (entry point) for the NCBI application.

virtual void SetupArgDescriptions(CArgDescriptions *arg_desc)

Setup the command line argument descriptions.

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define NON_CONST_ITERATE(Type, Var, Cont)

Non constant version of ITERATE macro.

const CNcbiArguments & GetArguments(void) const

Get the application's cached unprocessed command-line arguments.

@ eRequires

One argument requires another.

@ eInputFile

Name of file (must exist and be readable)

@ eString

An arbitrary string.

@ eOutputFile

Name of file (must be writable)

#define NCBI_THROW(exception_class, err_code, message)

Generic macro to throw an exception, given the exception class, error code and message string.

TEntries GetEntries(const string &mask=kEmptyStr, TGetEntriesFlags flags=0) const

Get directory entries based on the specified "mask".

string GetBase(void) const

Get the base entry name without extension.

bool CreatePath(TCreateFlags flags=fCreate_Default) const

Create the directory path recursively possibly more than one at a time.

static string ConcatPathEx(const string &first, const string &second)

Concatenate two parts of the path for any OS.

const string & GetPath(void) const

Get entry path.

@ fIgnoreRecursive

Suppress "self recursive" elements (the directories "." and "..").

static void GetLabel(const CObject &obj, string *label, ELabelType type=eDefault)

virtual const CTypeInfo * GetThisTypeInfo(void) const =0

ESerialDataFormat

Data file format.

@ eSerial_AsnText

ASN.1 text.

@ eSerial_AsnBinary

ASN.1 binary.

string GetSeqIdString(bool with_version=false) const

Return seqid string with optional version for text seqid type.

CConstRef< CSeq_id > GetSeqId(void) const

CConstRef< CSeq_id > GetSeqIdOrNull(void) const

static CSeq_id_Handle GetHandle(const CSeq_id &id)

Normal way of getting a handle, works for any seq-id.

static CObjectIStream * Open(ESerialDataFormat format, CNcbiIstream &inStream, bool deleteInStream)

Create serial object reader and attach it to an input stream.

void AddDataLoader(const string &loader_name, TPriority pri=kPriority_Default)

Add data loader by name.

CSeq_id_Handle GetAccVer(const CSeq_id_Handle &idh, TGetFlags flags=0)

Get accession.version Seq-id Returns null CSeq_id_Handle if the sequence is not found or if it doesn'...

static CRef< CObjectManager > GetInstance(void)

Return the existing object manager or create one.

void ResetDataAndHistory(void)

Clear all information in the scope except added data loaders.

bool IsNull(void) const THROWS_NONE

Check if pointer is null – same effect as Empty().

TObjectType * GetPointer(void) THROWS_NONE

Get pointer,.

void Reset(void)

Reset reference object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

IO_PREFIX::ostream CNcbiOstream

Portable alias for ostream.

IO_PREFIX::istream CNcbiIstream

Portable alias for istream.

IO_PREFIX::ifstream CNcbiIfstream

Portable alias for ifstream.

@ eNocase

Case insensitive compare.

string AsString(const CTimeFormat &format=kEmptyStr, TSeconds out_tz=eCurrentTimeZone) const

Transform time to string.

@ eCurrent

Use current time. See also CCurrentTime.

const string & GetName(void) const

Get name of this type.

static const char label[]

const TCreate_date & GetCreate_date(void) const

Get the Create_date member data.

void SetTitle(const TTitle &value)

Assign a value to Title data member.

list< CRef< CProjectItem > > TItems

void SetCreate_date(TCreate_date &value)

Assign a value to Create_date data member.

const TInfo & GetInfo(void) const

Get the Info member data.

void SetLabel(const TLabel &value)

Assign a value to Label data member.

TFolders & SetFolders(void)

Assign a value to Folders data member.

bool IsSetFolders(void) const

Check if a value has been assigned to Folders data member.

bool IsSetItems(void) const

Check if a value has been assigned to Items data member.

const TLabel & GetLabel(void) const

Get the Label member data.

const TFolders & GetFolders(void) const

Get the Folders member data.

const TTitle & GetTitle(void) const

Get the Title member data.

list< CRef< CProjectFolder > > TFolders

void SetInfo(TInfo &value)

Assign a value to Info data member.

const TItems & GetItems(void) const

Get the Items member data.

TItems & SetItems(void)

Assign a value to Items data member.

const Tdata & Get(void) const

Get the member data.

const TDesc & GetDesc(void) const

Get the Desc member data.

bool CanGetDesc(void) const

Check if it is safe to call GetDesc method.

list< CRef< CAnnotdesc > > Tdata

The blob sat and sat key Both must be positive integers</td > n< td > Non empty string The interpretation of the blob id depends on a processor Cassandra n processor expects the following format

constexpr auto sort(_Init &&init)

double value_type

The numeric datatype used by the parser.

Magic spell ;-) needed for some weird compilers... very empiric.

Defines the CNcbiApplication and CAppException classes for creating NCBI applications.

Defines command line argument related classes.

Defines unified interface to application:

Defines classes: CDirEntry, CFile, CDir, CSymLink, CMemoryFile, CFileUtil, CFileLock,...

std::istream & in(std::istream &in_, double &x_)

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4