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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/ftaerr_8cpp_source.html below:

NCBI C++ ToolKit: src/objtools/flatfile/ftaerr.cpp Source File

6 #include <forward_list> 18 #define THIS_FILE "ftaerr.cpp" 20 #define MESSAGE_DIR "/am/ncbiapdata/errmsg" 101 const char

*

months

[] = {

"Jan"

,

"Feb"

,

"Mar"

,

"Apr"

,

"May"

,

"Jun"

,

"Jul"

,

"Aug"

,

"Sep"

,

"Oct"

,

"Nov"

,

"Dec"

};

103

thread_local unique_ptr<FtaMsgPost>

bmp

;

109  if

(strsevcode.empty())

120  if

(

auto

it = sStringToInt.

find

(strsevcode);

121

it != sStringToInt.

end

()) {

130  const char

* module,

int code

,

int

subcode,

string

& strcode,

string

& strsubcode,

ErrSev

& sevcode)

142  for

(

const auto

& bmmf :

bmp

->bmmf_list) {

143  if

(bmmf.modname != module) {

148  for

(

const auto

& bmmt : bmmf.bmmt_list) {

149  if

(bmmt.inttag !=

code

)

152

strcode = bmmt.strtag;

153  for

(

const auto

& bmctx : bmmt.bmctx_list) {

154  if

(bmctx.intsubtag != subcode)

157

strsubcode = bmctx.strsubtag;

158

sevcode = bmctx.intseverity;

171

FILE* fd = fopen(

buf

.c_str(),

"r"

);

174

fd = fopen(

buf

.c_str(),

"r"

);

180  auto

& bmmf =

bmp

->bmmf_list.emplace_front();

181

bmmf.modname = module;

182

bmmf.filename =

buf

;

184  while

(fgets(s, 2047, fd)) {

185  if

(s[0] !=

'$'

|| (s[1] !=

'^'

&& s[1] !=

'$'

))

192  for

(p = s + 2; *p ==

' '

|| *p ==

'\t'

; p++) {}

193  for

(q = p; *p && *p !=

','

; p++) {}

200  for

(*p++ =

','

; *p ==

' '

|| *p ==

'\t'

; p++) {}

201  for

(q = p; *p >=

'0'

&& *p <=

'9'

; p++) {}

216  if

(s[1] ==

'^'

&& ch ==

','

) {

217  for

(p++; *p ==

' '

|| *p ==

'\t'

; p++) {}

219

*p && *p !=

' '

&& *p !=

'\t'

&& *p !=

'\n'

&& *p !=

','

;

224  if

(!

strcmp

(q,

"SEV_INFO"

) || !

strcmp

(q,

"SEV_WARNING"

) ||

225

!

strcmp

(q,

"SEV_ERROR"

) || !

strcmp

(q,

"SEV_REJECT"

) ||

226

!

strcmp

(q,

"SEV_FATAL"

)) {

234  auto

& bmmt = bmmf.bmmt_list.emplace_front();

237  if

(val2 ==

code

&& strcode.empty())

243  if

(bmmf.bmmt_list.empty()) {

247  auto

& bmmt = bmmf.bmmt_list.front();

248  auto

& bmctx = bmmt.bmctx_list.emplace_front();

250

bmctx.strsubtag = val1;

251

bmctx.intsubtag = val2;

254  if

(val2 == subcode && strsubcode.empty() && ! strcode.empty()) {

257

sevcode = bmctx.intseverity;

275  bmp

->hook_only =

false

;

295  bmp

->prefix_accession = name;

298  bmp

->prefix_locus = name;

301  if

(name.size() > 20)

302

name = name.substr(0, 20);

313  bmp

->prefix_accession.clear();

316  bmp

->prefix_locus.clear();

319  bmp

->prefix_feature.clear();

330  if

(! logfile || ! *logfile)

336  if

(

bmp

->logfile.empty()) {

337  bmp

->logfile = logfile;

340  if

(!

bmp

->lfd && !

bmp

->logfile.empty()) {

342

tm = localtime(&now);

343  i

= tm->tm_hour % 12;

347  bmp

->lfd = fopen(

bmp

->logfile.c_str(),

"a"

);

349  "\n========================[ %s %d, %d %2d:%02d %s ]========================\n"

,

355

(tm->tm_hour >= 12) ?

"PM"

:

"AM"

);

368  bmp

->show_msg_codes =

true

;

370  bmp

->show_log_codes =

true

;

372  bmp

->show_msg_codeline =

true

;

374  bmp

->show_log_codeline =

true

;

380  if

(!

str

||

str

[0] ==

'\0'

)

386

fprintf(

bmp

->lfd,

"%s"

,

str

);

398  bmp

->loglevel = sev;

411  bmp

->msglevel = sev;

431  switch

(c_severity) {

452  return

(cxx_severity);

460  char

fpiBuffer[1024];

471  int

fpiIntcode = lev1;

472  int

fpiIntsubcode = lev2;

475  string

fpiStrsubcode;

478  const char

* fpiFname =

fec

.

fname

;

485  if

(fpiModule && *fpiModule)

486  FtaErrGetMsgCodes

(fpiModule, fpiIntcode, fpiIntsubcode, fpiStrcode, fpiStrsubcode, fpiSevcode);

488

fpiModule =

nullptr

;

493  if

(

bmp

->appname.empty())

496

stringstream textStream;

497  if

(! fpiStrcode.empty()) {

498

textStream <<

"["

<< fpiStrcode.c_str();

499  if

(! fpiStrsubcode.empty()) {

500

textStream <<

"."

<< fpiStrsubcode.c_str();

505  if

(

bmp

->show_log_codeline) {

506

textStream <<

"{"

<< fpiFname <<

", line "

<< fpiLine;

508  if

(!

bmp

->prefix_locus.empty()) {

509

textStream <<

bmp

->prefix_locus <<

": "

;

511  if

(!

bmp

->prefix_accession.empty()) {

512

textStream <<

bmp

->prefix_accession <<

": "

;

514  if

(!

bmp

->prefix_feature.empty()) {

515

textStream <<

bmp

->prefix_feature <<

" "

;

529

.

Report

(fpiModule ? fpiModule :

""

,

530

sSeverityMap.at(fpiSevcode),

550  if

(

str

.size() > 1023)

551  str

=

str

.substr(0, 1023);

static CFlatFileMessageReporter & GetInstance()

void Report(const string &module, EDiagSev severity, int code, int subcode, const string &text, int lineNum=-1)

const_iterator end() const

const_iterator find(const key_type &key) const

int fta_atoi(string_view sv)

static ErrSev FtaStrSevToIntSev(const string &strsevcode)

bool ErrSetLog(const char *logfile)

void FtaInstallPrefix(int prefix, string_view name, string_view location)

ErrSev ErrSetLogLevel(ErrSev sev)

void FtaDeletePrefix(int prefix)

void Nlm_ErrSetContext(const char *module, const char *fname, int line)

thread_local unique_ptr< FtaMsgPost > bmp

void Nlm_ErrPostStr(ErrSev sev, int lev1, int lev2, string_view str)

void ErrSetOptFlags(int flags)

static void s_ReportError(ErrSev sev, int lev1, int lev2, string_view msg)

ErrSev ErrSetMessageLevel(ErrSev sev)

EDiagSev ErrCToCxxSeverity(int c_severity)

NCBI_UNUSED string ErrFormat(const char *fmt,...)

void ErrLogPrintStr(const char *str)

static void FtaErrGetMsgCodes(const char *module, int code, int subcode, string &strcode, string &strsubcode, ErrSev &sevcode)

static DLIST_TYPE *DLIST_NAME() prev(DLIST_LIST_TYPE *list, DLIST_TYPE *item)

static const char * str(char *buf, int n)

static const char location[]

static string GetAppName(EAppNameType name_type=eBaseName, int argc=0, const char *const *argv=NULL)

EDiagSev

Severity level for the posted diagnostics.

@ eDiag_Trace

Trace message.

@ eDiag_Info

Informational message.

@ eDiag_Error

Error message.

@ eDiag_Warning

Warning message.

@ eDiag_Fatal

Fatal error – guarantees exit(or abort)

@ eDiag_Critical

Critical error message.

static char GetPathSeparator(void)

Get path separator symbol specific for the current platform.

static string GetCwd(void)

Get the current working directory.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

The blob sat and sat key Both must be positive integers</td > n< td > Non empty string The interpretation of the blob id depends on a processor Cassandra n processor expects the following format

int strcmp(const char *str1, const char *str2)

Defines the CNcbiApplication and CAppException classes for creating NCBI applications.

Defines classes: CDirEntry, CFile, CDir, CSymLink, CMemoryFile, CFileUtil, CFileLock,...

static SLJIT_INLINE sljit_ins msg(sljit_gpr r, sljit_s32 d, sljit_gpr x, sljit_gpr b)

std::forward_list< FtaMsgModTag > bmmt_list

std::forward_list< FtaMsgModTagCtx > bmctx_list

std::forward_list< FtaMsgModFile > bmmf_list


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