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NCBI C++ ToolKit: src/objtools/flatfile/ftaerr.cpp File Reference

#include <ncbi_pch.hpp>
#include <string.h>
#include <time.h>
#include <sstream>
#include <forward_list>
#include <corelib/ncbiapp.hpp>
#include <corelib/ncbifile.hpp>
#include "flatfile_message_reporter.hpp"
#include "ftaerr.hpp"
#include "ftacpp.hpp"

Go to the source code of this file.

Go to the SVN repository for this file.

  USING_SCOPE (objects)   static ErrSev  FtaStrSevToIntSev (const string &strsevcode)   static void  FtaErrGetMsgCodes (const char *module, int code, int subcode, string &strcode, string &strsubcode, ErrSev &sevcode)   void  FtaErrInit ()   void  FtaErrFini (void)   void  FtaInstallPrefix (int prefix, string_view name, string_view location)   void  FtaDeletePrefix (int prefix)   bool  ErrSetLog (const char *logfile)   void  ErrSetOptFlags (int flags)   void  ErrLogPrintStr (const char *str)   ErrSev  ErrSetLogLevel (ErrSev sev)   ErrSev  ErrSetMessageLevel (ErrSev sev)   void  Nlm_ErrSetContext (const char *module, const char *fname, int line)   EDiagSev  ErrCToCxxSeverity (int c_severity)   NCBI_UNUSED string  ErrFormat (const char *fmt,...)   static void  s_ReportError (ErrSev sev, int lev1, int lev2, string_view msg)   void  Nlm_ErrPostStr (ErrSev sev, int lev1, int lev2, string_view str)   const char *  months [] = { "Jan", "Feb", "Mar", "Apr", "May", "Jun", "Jul", "Aug", "Sep", "Oct", "Nov", "Dec" }   thread_local unique_ptr< FtaMsgPost >  bmp   FtaErrCode  fec   ◆ MESSAGE_DIR #define MESSAGE_DIR   "/am/ncbiapdata/errmsg"

Definition at line 20 of file ftaerr.cpp.

◆ THIS_FILE #define THIS_FILE   "ftaerr.cpp"

Definition at line 18 of file ftaerr.cpp.

◆ ErrCToCxxSeverity()

Definition at line 427 of file ftaerr.cpp.

References eDiag_Critical, eDiag_Error, eDiag_Fatal, eDiag_Info, eDiag_Trace, eDiag_Warning, SEV_ERROR, SEV_FATAL, SEV_INFO, SEV_NONE, SEV_REJECT, and SEV_WARNING.

◆ ErrFormat() ◆ ErrLogPrintStr() void ErrLogPrintStr ( const char *  str ) ◆ ErrSetLog() ◆ ErrSetLogLevel() ◆ ErrSetMessageLevel() ◆ ErrSetOptFlags() void ErrSetOptFlags ( int  flags ) ◆ FtaDeletePrefix() void FtaDeletePrefix ( int  prefix )

Definition at line 310 of file ftaerr.cpp.

References bmp, PREFIX_ACCESSION, PREFIX_FEATURE, and PREFIX_LOCUS.

Referenced by EmblIndex(), fta_parse_buf(), GenBankIndex(), ParseFeatureBlock(), sParseFlatfile(), SPFeatGeneral(), CEmbl2Asn::xGetEntry(), CGenbank2Asn::xGetEntry(), CSwissProt2Asn::xGetEntry(), CXml2Asn::xGetEntry(), and XMLParseFeatureBlock().

◆ FtaErrFini() ◆ FtaErrGetMsgCodes() ◆ FtaErrInit()

Definition at line 265 of file ftaerr.cpp.

References bmp, fec, FtaErrCode::fname, CNcbiApplicationAPI::GetAppName(), FtaErrCode::line, and FtaErrCode::module.

Referenced by CFlatFileParser::CFlatFileParser(), ErrLogPrintStr(), ErrSetLog(), ErrSetLogLevel(), ErrSetMessageLevel(), ErrSetOptFlags(), FtaErrGetMsgCodes(), Nlm_ErrPostStr(), and Nlm_ErrSetContext().

◆ FtaInstallPrefix() void FtaInstallPrefix ( int  prefix, string_view  name, string_view  location  )

Definition at line 289 of file ftaerr.cpp.

References bmp, format, location, PREFIX_ACCESSION, PREFIX_FEATURE, and PREFIX_LOCUS.

Referenced by err_install(), fta_parse_buf(), GetAccession(), InitialEntry(), ParseFeatureBlock(), sParseFlatfile(), SPFeatGeneral(), XMLInitialEntry(), and XMLParseFeatureBlock().

◆ FtaStrSevToIntSev() ◆ Nlm_ErrPostStr() void Nlm_ErrPostStr ( ErrSev  sev, int  lev1, int  lev2, string_view  str  ) ◆ Nlm_ErrSetContext() void Nlm_ErrSetContext ( const char *  module, const char *  fname, int  line  ) ◆ s_ReportError()

Definition at line 468 of file ftaerr.cpp.

References bmp, eDiag_Critical, eDiag_Error, eDiag_Fatal, eDiag_Info, eDiag_Trace, eDiag_Warning, fec, FtaErrCode::fname, FtaErrGetMsgCodes(), CNcbiApplicationAPI::GetAppName(), CFlatFileMessageReporter::GetInstance(), FtaErrCode::line, FtaErrCode::module, msg(), CFlatFileMessageReporter::Report(), SEV_ERROR, SEV_FATAL, SEV_INFO, SEV_NONE, SEV_REJECT, and SEV_WARNING.

Referenced by Nlm_ErrPostStr().

◆ USING_SCOPE() ◆ bmp

Definition at line 103 of file ftaerr.cpp.

Referenced by ResidueProfiles::addOneRow(), CSingleAuthorPanel::CreateControls(), CreateMenu(), ErrLogPrintStr(), ErrSetLog(), ErrSetLogLevel(), ErrSetMessageLevel(), ErrSetOptFlags(), findHighestScoringRowByPssm(), MultipleAlignment::findParentalCastible(), BlockFormater::formatOneRow(), FtaDeletePrefix(), FtaErrFini(), FtaErrGetMsgCodes(), FtaErrInit(), FtaInstallPrefix(), PssmMaker::getGuideAlignment(), FlexiDm::GetPercentIdentities(), CConfigureTracksDlg::Init(), IntersectByMaster(), Nlm_ErrPostStr(), Nlm_ErrSetContext(), CwxTableListCtrl::OnGetItemColumnImage(), CDUpdater::processPendingToNormal(), CDRefresher::refresh(), ReMasterCdWithoutUnifiedBlocks(), ConsensusMaker::remasterWithConsensus(), s_ReportError(), PssmScorer::score(), SetMenuItemMarginWidth(), PSSMWrapper::UnpackMatrix(), CDUpdater::update(), PT::CPTIcons::x_AddIconToImageList(), CDockMarkerWindow::x_DrawButton(), CDockPanel::x_DrawClientElements(), CMinPanelContainer::x_DrawItem(), and CMinPanelContainer::x_MeasureItem().

◆ fec ◆ months const char* months[] = { "Jan", "Feb", "Mar", "Apr", "May", "Jun", "Jul", "Aug", "Sep", "Oct", "Nov", "Dec" }

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