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NCBI C++ ToolKit: src/objtools/flatfile/ftablock.h Source File

std::list<CRef<objects::CPub>>

;

std::list<CRef<objects::CDelta_seq>>

;

objects::CSeq_entry*

=

;

objects::CGenetic_code::C_E

;

objects::CSeq_gap::TType

= objects::CSeq_gap::eType_unknown;

& featName,

& operon,

objects::CSeq_loc&

) :

= std::forward_list<DataBlk>;

()

{

! holds_alternative<monostate>(

); }

std::variant<monostate, TList, EntryBlk*, FeatBlk*, const TXmlIndexList*>

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

const TList & GetSubBlocks() const

void SetXmlData(const TXmlIndexList &xil)

DataBlk(int type_=0, char *offset=nullptr, size_t len_=0)

std::variant< monostate, TList, EntryBlk *, FeatBlk *, const TXmlIndexList * > mData

std::forward_list< DataBlk > TList

const TXmlIndexList & GetXmlData() const

EntryBlk * GetEntryData() const

FeatBlk * GetFeatData() const

void SetEntryData(EntryBlk *)

struct DataBlk::@1166 mBuf

void SetFeatData(FeatBlk *)

list< CRef< objects::CSeq_entry > > TEntryList

DataBlk::TList TDataBlkList

std::list< CRef< objects::COrgMod > > TOrgModList

forward_list< GapFeats > TGapFeatsList

std::list< std::string > TKeywordList

std::list< CRef< objects::CPub > > TPubList

TDataBlkList::iterator DataBlkIter

std::list< CRef< objects::CSeq_id > > TSeqIdList

std::list< CRef< objects::CSeq_loc > > TSeqLocList

string location_to_string_or_unknown(const objects::CSeq_loc &)

std::list< CRef< objects::CSeq_feat > > TSeqFeatList

forward_list< GapFeats >::iterator GapFeatsPtr

TDataBlkList::const_iterator DataBlkCIter

forward_list< string > TokenBlkList

std::list< CRef< objects::CSeqdesc > > TSeqdescList

std::list< CRef< objects::CDelta_seq > > TDeltaList

forward_list< XmlIndex > TXmlIndexList

std::list< std::string > TAccessionList

std::vector< CRef< objects::CGb_qual > > TGbQualVector

std::vector< CRef< objects::CUser_object > > TUserObjVector

static const char location[]

SStrictId_Tax::TId TTaxId

Taxon id type.

uint8_t Uint1

1-byte (8-bit) unsigned integer

int16_t Int2

2-byte (16-bit) signed integer

int32_t Int4

4-byte (32-bit) signed integer

char Char

Alias for char.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

CRef< objects::CSeq_entry > seq_entry

CConstRef< objects::CSeq_loc > mLocation

string LocationStr() const

FTAOperon(const string &featName, const string &operon, const objects::CSeq_loc &location)

objects::CLinkage_evidence::TLinkage_evidence asn_linkage_evidence

objects::CSeq_gap::TType asn_gap_type

CRef< objects::CPatent_seq_id > psip

CRef< objects::CDate_std > date

objects::CSeq_entry * biosep

objects::CGenetic_code::C_E gcode

forward_list< XmlIndex > subtags

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