Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/format__guess_8hpp_source.html below:

NCBI C++ ToolKit: include/util/format_guess.hpp Source File

CFormatGuessHints;

eFlatFileSequence = 13,

eFiveColFeatureTable = 14,

ePeptideMapping = 60,

eFlatFileGenbank = 65,

eFlatFileUniProt = 67,

RemoveFormat(TFormat fmt);

IsEmpty(

)

;

IsPreferred(TFormat fmt)

;

IsDisabled(TFormat fmt)

;

bitset<CFormatGuess::eFormat_max>

;

EnsureTestBuffer();

EnsureSplitLines();

TestFormatRepeatMasker(EMode);

TestFormatPhrapAce(EMode);

TestFormatGtf(EMode);

TestFormatGvf(EMode);

TestFormatGff3(EMode);

TestFormatGff2(EMode);

TestFormatGlimmer3(EMode);

TestFormatAgp(EMode);

TestFormatNewick(EMode);

TestFormatXml(EMode);

TestFormatAlignment(EMode);

TestFormatCLUSTAL(

);

TestFormatBinaryAsn(EMode);

TestFormatDistanceMatrix(EMode);

TestFormatTaxplot(EMode);

TestFormatFlatFileSequence(EMode);

TestFormatFiveColFeatureTable(EMode);

TestFormatTable(EMode);

TestFormatFasta(EMode);

TestFormatTextAsn(EMode);

TestFormatSnpMarkers(EMode);

TestFormatBed(EMode);

TestFormatBed15(EMode);

TestFormatWiggle(EMode);

TestFormatHgvs(EMode);

TestFormatZip(EMode);

TestFormatGZip(EMode);

TestFormatZstd(EMode);

TestFormatBZip2(EMode);

TestFormatLzo(EMode);

TestFormatSra(EMode);

TestFormatBam(EMode);

TestFormatVcf(EMode);

TestFormatAugustus(EMode);

TestFormatJson(EMode);

TestFormatPsl(EMode);

TestFormatFlatFileGenbank(EMode);

TestFormatFlatFileEna(EMode);

TestFormatFlatFileUniProt(EMode);

IsInputRepeatMaskerWithoutHeader();

IsInputRepeatMaskerWithHeader();

IsLineFlatFileSequence(

&);

IsAsnComment(

vector<string>&);

IsLinePsl(

&,

ignoreFirstColumn);

x_TestTableDelimiter(

& delims);

x_CheckJsonStart(

& testString)

;

x_StripJsonStrings(

& testString)

;

x_FindJsonStringLimits(

& testString, list<size_t>&

)

;

x_CheckStripJsonPunctuation(

& testString)

;

x_StripJsonPunctuation(

& testString)

;

x_StripJsonKeywords(

& testString)

;

x_CheckStripJsonNumbers(

& testString)

;

x_IsTruncatedJsonNumber(

& testString)

;

x_IsTruncatedJsonKeyword(

& testString)

;

x_IsNumber(

& testString)

;

x_IsBlankOrNumbers(

& testString)

;

x_TryProcessCLUSTALSeqData(

& line,

&

,

& seg_length)

;

x_LooksLikeCLUSTALConservedInfo(

& line)

;

m_Preferred.reset(fmt);

m_Disabled = ~m_Preferred;

m_Disabled.reset(fmt);

m_Preferred.reset(fmt);

m_Preferred.count() == 0 && m_Disabled.count() == 0;

m_Preferred.test(fmt);

m_Disabled.test(fmt);

Hints for guessing formats.

CFormatHints & AddDisabledFormat(TFormat fmt)

Mark the format as disabled.

void RemoveFormat(TFormat fmt)

Remove format hint.

bitset< CFormatGuess::eFormat_max > THints

bool IsEmpty(void) const

Check if there are any hints are set at all.

CFormatHints & Reset(void)

Remove all hints.

CFormatGuess::EFormat TFormat

bool IsPreferred(TFormat fmt) const

Check if the format is listed as preferred.

CFormatHints & AddPreferredFormat(TFormat fmt)

Mark the format as preferred.

CFormatHints & DisableAllNonpreferred(void)

Disable all formats not marked as preferred.

bool IsDisabled(TFormat fmt) const

Check if the format is listed as disabled.

Class implements different ad-hoc unreliable file format identifications.

unsigned int m_iStatsCountBraces

CFormatHints & GetFormatHints(void)

Get format hints.

unsigned int m_iStatsCountData

size_t x_FindNextJsonStringStop(const string &input, const size_t from_pos) const

bool IsEnabled(EFormat format) const

Check whether testing is enabled for given format.

EFormat

The formats are checked in the same order as declared here.

unsigned int m_iStatsCountAaChars

streamsize m_iTestBufferSize

unsigned int m_iStatsCountAlNumChars

std::list< std::string > m_TestLines

streamsize m_iTestDataSize

unsigned int m_iStatsCountDnaChars

@ eThrowOnBadSource

Throw an exception if the data source (stream, file) can't be read.

@ eST_Lax

Implement historic behavior, risking false positives.

@ eST_Default

Be relatively strict, but still allow for typos.

Include a standard set of the NCBI C++ Toolkit most basic headers.

static const char * str(char *buf, int n)

static const TDS_WORD limits[]

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

IO_PREFIX::istream CNcbiIstream

Portable alias for istream.

The blob sat and sat key Both must be positive integers</td > n< td > Non empty string The interpretation of the blob id depends on a processor Cassandra n processor expects the following format

static bool IsSupportedFormat(CFormatGuess::EFormat format)

NCBI_XUTIL_EXPORT

Parameter to control printing diagnostic message about conversion of static array data from a differe...

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4