A RetroSearch Logo

Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Search Query:

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/format__flags_8cpp.html below:

NCBI C++ ToolKit: src/objtools/align_format/format_flags.cpp File Reference

Go to the source code of this file.

Go to the SVN repository for this file.

◆ DescribeSAMOutputFormatSpecifiers() string DescribeSAMOutputFormatSpecifiers ( ) ◆ DescribeTabularOutputFormatSpecifiers() string DescribeTabularOutputFormatSpecifiers ( bool  is_igblast ) ◆ kArgAlignSeqList() const char* kArgAlignSeqList ( "alignseqlist"  ) ◆ kArgMetadata() const char* kArgMetadata ( "searchmetadata"  ) ◆ kArgNumAlignments() const char* kArgNumAlignments ( "num_alignments"  ) ◆ kArgNumDescriptions() const char* kArgNumDescriptions ( "num_descriptions"  ) ◆ kArgOutputFormat() const char* kArgOutputFormat ( "outfmt"  ) ◆ kArgProduceHtml() const char* kArgProduceHtml ( "html"  ) ◆ kArgQueryIndex() const char* kArgQueryIndex ( "queryindex"  ) ◆ kArgShowGIs() const char* kArgShowGIs ( "show_gis"  ) ◆ kArgSortHits() const char* kArgSortHits ( "sorthits"  ) ◆ kArgSortHSPs() const char* kArgSortHSPs ( "sorthsps"  ) ◆ kDfltArgTabularOutputFmtTag() ◆ kDfltArgNumAlignments const size_t kDfltArgNumAlignments = 250 ◆ kDfltArgNumDescriptions const size_t kDfltArgNumDescriptions = 500 ◆ kDfltArgOutputFormat ◆ kDfltArgProduceHtml

Default value which specifies whether to create output as HTML or not.

Definition at line 223 of file format_flags.cpp.

◆ kDfltArgShowGIs

Default value for the "show GIs" formatter option.

Definition at line 217 of file format_flags.cpp.

◆ kDfltArgTabularOutputFmt const char* kDfltArgTabularOutputFmt ◆ kDfltLineLength const size_t kDfltLineLength = 60 ◆ kNumSAMOutputFormatSpecifiers const size_t kNumSAMOutputFormatSpecifiers = 2 ◆ kNumTabularOutputFormatSpecifiers const size_t kNumTabularOutputFormatSpecifiers = 50 ◆ sc_FormatSpecifiers ◆ sc_SAMFormatSpecifiers Initial value:

= {

"Include Sequence Data",

"Subject as Reference Seq",

}

@ eSAM_SubjAsRefSeq

Subject as reference seqs.

@ eSAM_SeqData

Include seq data.

Array containing the supported output formats for SAM output.

Definition at line 232 of file format_flags.cpp.

Referenced by DescribeSAMOutputFormatSpecifiers().

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4