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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/flat__qual__slots_8cpp_source.html below:

NCBI C++ ToolKit: src/objtools/format/flat_qual_slots.cpp Source File

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50 # error TYPICAL_FQ should not be defined yet 54 #define TYPICAL_FQ(x) { eFQ_##x, #x } 57  static const

TFeatQualToName kFeatQualToNames[] = {

186

TFeatQualToNameMap::const_iterator find_iter =

187

kFeatQualToNameMap.find(eFeatureQualifier);

188  if

( find_iter != kFeatQualToNameMap.end() ) {

189  return

find_iter->second;

192  return "UNKNOWN_FEAT_QUAL"

;

198 # error TYPICAL_SQ should not be defined yet 202 #define TYPICAL_SQ(x) { eSQ_##x, #x } 205  static const

TSourceQualToName kSourceQualToNames[] = {

319

TSourceQualToNameMap::const_iterator find_iter =

320

kSourceQualToNameMap.find(eSourceQualifier);

321  if

( find_iter != kSourceQualToNameMap.end() ) {

322  return

find_iter->second;

325  return "UNKNOWN_SOURCE_QUAL"

;

331  switch

( eOrgModSubtype )

337 # error CASE_ORGMOD should NOT be already defined here. 340 #define CASE_ORGMOD(x) case COrgMod::eSubtype_##x: return eSQ_##x; 389  switch

( eSubSourceSubtype ) {

393 # error DO_SS should NOT have already been defined here. 396 #define DO_SS(x) case CSubSource::eSubtype_##x: return eSQ_##x; 415  DO_SS

(plasmid_name);

416  DO_SS

(transposon_name);

417  DO_SS

(insertion_seq_name);

418  DO_SS

(plastid_name);

421  DO_SS

(endogenous_virus_name);

423  DO_SS

(environmental_sample);

424  DO_SS

(isolation_source);

427  DO_SS

(collection_date);

428  DO_SS

(collected_by);

429  DO_SS

(identified_by);

430  DO_SS

(fwd_primer_seq);

431  DO_SS

(rev_primer_seq);

432  DO_SS

(fwd_primer_name);

433  DO_SS

(rev_primer_name);

436  DO_SS

(linkage_group);

438  DO_SS

(whole_replicon);

class CStaticArrayMap<> is an array adaptor that provides an STLish interface to statically-defined a...

CTempString implements a light-weight string on top of a storage buffer whose lifetime management is ...

CTempString GetStringOfSourceQual(ESourceQualifier eSourceQualifier)

Given a ESourceQualifier, this returns the qualifier name.

ESourceQualifier GetSourceQualOfOrgMod(COrgMod::ESubtype eOrgModSubtype)

Translate an org-mod subtype into a sourcequalifier.

ESourceQualifier GetSourceQualOfSubSource(CSubSource::ESubtype eSubSourceSubtype)

Translate a subsource subtype into a sourcequalifier.

CTempString GetStringOfFeatQual(EFeatureQualifier eFeatureQualifier)

Given a EFeatureQualifier, this returns the qualifier name.

@ eSQ_NUM_SOURCE_QUALIFIERS

@ eSQ_endogenous_virus_name

@ eFQ_NUM_SOURCE_QUALIFIERS

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

static const char label[]

@ eSubtype_other

ASN5: old-name (254) will be added to next spec.

@ eSubtype_nat_host

natural host of this specimen

#define DEFINE_STATIC_ARRAY_MAP(Type, Var, Array)

Template structure SStaticPair is simlified replacement of STL pair<> Main reason of introducing this...

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