Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/flat__file__context_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/widgets/seq/flat_file_context.cpp Source File

m_Formatter(&formatter),

m_BioseqEditor(bioseqEditor)

m_BioseqEditor->SetCallBack(

);

CAddToolbarTraverser(

& editor,

showIcons)

: m_Editor(editor), m_ShowIcons(showIcons) {}

ProcessItem(

& textItem)

flatTextItem->

(m_Editor.GetEditFlags(*flatItem));

ProcessItem(

& expandItem)

= m_Editor.GetEditFlags(*flatItem);

(

!= 0 && m_ShowIcons)

registered =

;

,

,

);

,

,

);

);

,

,

);

,

,

);

wxMenu* menu = cmd_reg.

(kFlatFileContextMenu);

(m_BioseqEditor) {

unique_ptr<wxMenu> editorMenu(m_BioseqEditor->CreateContextMenu());

(editorMenu.get()) {

(*menu, *editorMenu);

pos = m_Panel->CalcScrolledPosition(pos);

unique_ptr<wxMenu> menu(cmd_reg.

(kFlatFileBioseqMenu));

unique_ptr<wxMenu> editorMenu(m_BioseqEditor->CreateBioseqMenu());

(editorMenu.get()) {

(*menu, *editorMenu);

m_Panel->PopupMenu(menu.get(), pos);

* odesc =

*

(item->GetObject());

(*odesc,

->GetHandle().GetSeq_entry_Handle());

(*ofeat,

->GetHandle().GetSeq_entry_Handle());

(sourceFeatureItem) {

(

.IsBiosrc()) {

& seqDesc = *dsrc_it;

(&bioSource2 == &bioSource) {

* molInfo =

*

(item->GetObject());

(; dsrc_it; ++dsrc_it) {

& seqDesc = *dsrc_it;

* desc =

*

(item->GetObject());

(*desc,

->GetHandle().GetSeq_entry_Handle());

titleEdit->SetTitle(defLineItem->

());

* seqDesc =

*

(item->GetObject());

(seqDesc && seqDesc->

())

(genomeProjectItem) {

(TEditObjectList::iterator it2 =

.begin(); it2 !=

.end();) {

* pobj = it2->m_Obj.GetPointer();

(objSet.

(pobj) != objSet.

()) {

(

.empty())

;

findLength =

.length();

(findLength > 60) {

block1 = *it, block2;

+= block2.substr(0, findLength - 1);

(

.length() >= findLength) {

(pos != string::npos) {

CSeqMarkertModifier _inst;

SetStyle(wxDC& dc)

dc.SetBackgroundMode(wxSOLID);

dc.SetTextForeground(wxColor(0,0,0));

dc.SetTextBackground(wxColor(175,238,238));

(startRow == endRow) {

startRow, 80, &seqMarker);

(

= startRow + 1;

< endRow; ++

)

ITextItem * GetItem(size_t index)

virtual void UpdatePositions()

virtual bool Traverse(ICompositeTraverser &traverser)

size_t GetItemCount() const

const string & GetDefline(void) const

void AddMarker(int startRow, int startCol, int endRow, int endCol, IStyleModifier *style)

CConstRef< CObject > m_Obj

virtual void Toggle(CTextPanelContext *context, bool update)

void AddGlyph(CGlyph *glyph)

void SetSelectable(bool selectable=true)

virtual bool IsExpanded() const

CTextItem * GetExpandedItem()

CTextItem * GetCollapsedItem()

virtual bool ProcessItem(CExpandItem &expandItem)

virtual bool ProcessItem(CTextItem &)

CExpandSeqsTraverser(CTextPanelContext &context, bool expand)

CTextPanelContext & m_Context

virtual bool ProcessItem(CExpandItem &expandItem)

CFindLocusTraverser(TConstScopedObjects &objects)

virtual bool ProcessItem(CTextItem &textItem)

TConstScopedObjects & m_SeqLocs

SConstScopedObject GetSeqLoc()

bool NextSequence() const

const objects::IFlatItem * GetFlatItem() const

CConstRef< objects::IFlatItem > m_Item

void SetEditFlags(int flags)

void OnCollapseSeqBlocks(wxCommandEvent &event)

virtual void GetVisibleObjects(TConstScopedObjects &objects)

bool ShowEditIcons() const

virtual int GetLeftMargin() const

virtual void GetCurrentSelection(TEditObjectList &objects)

virtual void EditItem(ITextItem *item, bool controlDown, bool shiftDown)

void OnCollapseAllFeatures(wxCommandEvent &event)

void OnCollapseSequences(wxCommandEvent &event)

void OnExpandAll(wxCommandEvent &event)

objects::CBioseq_Handle m_CurBioseq

void OnExpandAllFeatures(wxCommandEvent &event)

virtual void SetPanel(CTextItemPanel *panel)

CEditObject GetEditObject(CFlatFileTextItem &ffItem)

virtual wxString GetWorkDir() const

static void RegisterCommands(CUICommandRegistry &cmd_reg, wxFileArtProvider &provider)

virtual objects::CBioseq_Handle GetCurrentBioseq()

virtual void GetItemSelection(TFlatItemList &itemList)

virtual void InitDrawStream(CDrawTextOStream &stream, int startLine)

virtual void RootInitialized()

virtual bool FindSequence(const wxString &text)

CIRef< IBioseqEditor > m_BioseqEditor

void OnExpandSeqBlocks(wxCommandEvent &event)

CBioseqContext * GetContext(void)

const CSerialObject * GetObject(void) const

namespace ncbi::objects::

TSeqPos GetTo(void) const

TSeqPos GetFrom(void) const

Base class for all serializable objects.

CTextPosition GetEnd() const

CTextPosition GetStart() const

CTextBlock Normalized() const

void MakePosVisible(const CTextPosition &pos)

ITextItem * GetRootItem()

CTextBlock GetTextSelection() const

void SetSelection(const CTextBlock &selection)

virtual void SetPanel(CTextItemPanel *panel)

set< ITextItem * > m_SelectedItems

CUICommandRegistry is a centralized registry where all application commands should be registered.

static CUICommandRegistry & GetInstance()

the main instance associated with the application

wxMenu * CreateMenu(const SwxMenuItemRec *items)

create a menu from a static definition (see WX_*_MENU macros)

int RegisterCommand(CUICommand *cmd)

assumes ownership of the given object returns a command id (useful when registry is used for auto id ...

virtual bool Traverse(ICompositeTraverser &)=0

iterator_bool insert(const value_type &val)

const_iterator find(const key_type &key) const

const_iterator end() const

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

CConstRef< CObject > object

vector< SConstScopedObject > TConstScopedObjects

CSeq_entry_Handle GetSeq_entry_Handle(void) const

Get parent Seq-entry handle.

CConstRef< CSeq_feat > GetOriginalSeq_feat(void) const

CRef< CSeq_loc > GetRangeSeq_loc(TSeqPos start, TSeqPos stop, ENa_strand strand=eNa_strand_unknown) const

Return CSeq_loc referencing the given range and strand on the bioseq If start == 0,...

TObjectType * GetPointer(void) const THROWS_NONE

Get pointer,.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static void TruncateSpacesInPlace(string &str, ETrunc where=eTrunc_Both)

Truncate whitespace in a string (in-place)

static bool EqualNocase(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2)

Case-insensitive equality of a substring with another string.

static string & ToUpper(string &str)

Convert string to upper case – string& version.

bool IsStr(void) const

Check if variant Str is selected.

const TStr & GetStr(void) const

Get the variant data.

const TType & GetType(void) const

Get the Type member data.

const TData & GetData(void) const

Get the Data member data.

const TSource & GetSource(void) const

Get the variant data.

bool IsSource(void) const

Check if variant Source is selected.

bool IsPub(void) const

Check if variant Pub is selected.

const TMolinfo & GetMolinfo(void) const

Get the variant data.

@ e_User

user defined object

@ e_Molinfo

info on the molecule and techniques

@ e_Title

a title for this sequence

@ e_Source

source of materials, includes Org-ref

vector< CEditObject > TEditObjectList

vector< CConstRef< objects::IFlatItem > > TFlatItemList

static void text(MDB_val *v)

ViewerWindowBase::OnEditMenu ViewerWindowBase::OnJustification EVT_MENU(MID_SHOW_GEOM_VLTNS, ViewerWindowBase::OnShowGeomVltns) EVT_MENU(MID_FIND_PATTERN

#define WX_DEFINE_MENU(name)

New macros for defining menus for use with CUICommandRegistry.

#define WX_SUBMENU(label)

#define WX_MENU_SEPARATOR_L(label)

#define WX_MENU_ITEM(cmd)

static CS_CONTEXT * context

wxMenu * CreateMenu(const CMenuItem *item)

Creates a wxMenu object replicating the structure of CMenuItem.

void Merge(wxMenu &menu_1, const wxMenu &menu_2)

merges all items form menu_2 into menu_1, preserving the structure if possible

string ToStdString(const wxString &s)

void CleanupSeparators(wxMenu &menu)

Removes extra separators (in the begining or at the end of the menu, ot those that precede other sepa...

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4