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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/flat2asn_8cpp.html below:

NCBI C++ ToolKit: src/app/flat2asn/flat2asn.cpp File Reference

#include <ncbi_pch.hpp>
#include <corelib/ncbiapp.hpp>
#include <corelib/ncbifile.hpp>
#include <serial/objostrasn.hpp>
#include <objects/seqset/Bioseq_set.hpp>
#include <objtools/flatfile/flatfile_parser.hpp>
#include <objtools/flatfile/fta_parse_buf.h>
#include <objtools/logging/listener.hpp>

Include dependency graph for flat2asn.cpp:

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Classes class   CFlat2AsnApp   class   CFlat2AsnListener   Macros #define  THIS_FILE   "flat2asn.cpp"   Typedefs using  TConfig = Parser   Functions   USING_SCOPE (objects)   static bool  InitConfig (const CArgs &args, Parser &config)   int  main (int argc, const char *argv[])   Variables   USING_NCBI_SCOPE   Macro Definition Documentation ◆ THIS_FILE #define THIS_FILE   "flat2asn.cpp"

Definition at line 51 of file flat2asn.cpp.

Typedef Documentation ◆ TConfig using TConfig = Parser

Definition at line 56 of file flat2asn.cpp.

Function Documentation ◆ InitConfig() static bool InitConfig ( const CArgs &  args, Parser &  config  ) static

Definition at line 59 of file flat2asn.cpp.

References Parser::BioseqSet, format, fta_set_format_source(), Parser::HTGS, Parser::HTGSCON, Parser::Relaxed, Parser::Release, Parser::Seqsubmit, rapidjson::source, and string.

Referenced by CFlat2AsnApp::x_ParseArgs().

◆ main() int main ( int  argc, const char *  argv[]  )

Definition at line 405 of file flat2asn.cpp.

◆ USING_SCOPE() USING_SCOPE ( objects  ) Variable Documentation ◆ USING_NCBI_SCOPE USING_NCBI_SCOPE

Definition at line 53 of file flat2asn.cpp.

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