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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/fix__product__names_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/packages/pkg_sequence_edit/fix_product_names.cpp Source File

38 #include <wx/button.h> 74

wxWindowID

id

,

const

wxString& caption,

const

wxPoint& pos,

const

wxSize&

size

,

long

style )

78  Create

(parent,

id

, caption, pos,

size

, style);

89 

SetExtraStyle(wxWS_EX_BLOCK_EVENTS);

90

wxDialog::Create( parent,

id

, caption, pos,

size

, style );

95

GetSizer()->SetSizeHints(

this

);

137

wxBoxSizer* itemBoxSizer2 =

new

wxBoxSizer(wxVERTICAL);

138

itemDialog1->SetSizer(itemBoxSizer2);

140  m_BeforePunct

=

new

wxCheckBox( itemDialog1,

wxID_ANY

,

_

(

"Capital letters before punctuation should remain capitalized"

), wxDefaultPosition, wxDefaultSize, 0 );

142

itemBoxSizer2->Add(

m_BeforePunct

, 0, wxALIGN_LEFT|wxALL, 5);

144  m_BeforeCap

=

new

wxCheckBox( itemDialog1,

wxID_ANY

,

_

(

"Capital letters before other capital letters should remain capitalized"

), wxDefaultPosition, wxDefaultSize, 0 );

146

itemBoxSizer2->Add(

m_BeforeCap

, 0, wxALIGN_LEFT|wxALL, 5);

148  m_BeforeNum

=

new

wxCheckBox( itemDialog1,

wxID_ANY

,

_

(

"Capital letters before numbers should remain capitalized"

), wxDefaultPosition, wxDefaultSize, 0 );

150

itemBoxSizer2->Add(

m_BeforeNum

, 0, wxALIGN_LEFT|wxALL, 5);

152  m_RmCommas

=

new

wxCheckBox( itemDialog1,

wxID_ANY

,

_

(

"Commas should be removed"

), wxDefaultPosition, wxDefaultSize, 0 );

154

itemBoxSizer2->Add(

m_RmCommas

, 0, wxALIGN_LEFT|wxALL, 5);

156  m_KeepLast

=

new

wxCheckBox( itemDialog1,

wxID_ANY

,

_

(

"Keep caps single letter at the end"

), wxDefaultPosition, wxDefaultSize, 0 );

158

itemBoxSizer2->Add(

m_KeepLast

, 0, wxALIGN_LEFT|wxALL, 5);

160

wxBoxSizer* itemBoxSizer12 =

new

wxBoxSizer(wxHORIZONTAL);

161

itemBoxSizer2->Add(itemBoxSizer12, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

163

wxButton* itemButton13 =

new

wxButton( itemDialog1, wxID_OK,

_

(

"Accept"

), wxDefaultPosition, wxDefaultSize, 0 );

164

itemBoxSizer12->Add(itemButton13, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

166

wxButton* itemButton14 =

new

wxButton( itemDialog1, wxID_CANCEL,

_

(

"Cancel"

), wxDefaultPosition, wxDefaultSize, 0 );

167

itemBoxSizer12->Add(itemButton14, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

221  bool

modified =

false

;

226  string

new_name = *name;

227  FixCaps

(new_name, before_punct, before_cap, before_num, rm_commas, keep_last);

228

modified |= new_name != *name;

240  bool

modified =

false

;

244  FixCaps

(new_name, before_punct, before_cap, before_num, rm_commas, keep_last);

246

new_feat->

SetData

().SetRna().SetExt().SetName() = new_name;

251  FixCaps

(new_name, before_punct, before_cap, before_num, rm_commas, keep_last);

253

new_feat->

SetData

().SetRna().SetExt().SetGen().SetProduct() = new_name;

270  "coproporphyrinogen III"

,

316  "Mg\\-protoporphyrin IX"

,

362  size_t len

= name.size();

363  for

(

size_t i

= 0;

i

<

len

;

i

++)

366

!(before_punct &&

i

+1 <

len

&&

ispunct

(name[

i

+1])) &&

void AddCommand(IEditCommand &command)

static void FixCaps(string &name, bool before_punct, bool before_cap, bool before_num, bool rm_commas, bool keep_last)

CFixProductNames()

Constructors.

wxCheckBox * m_BeforePunct

CRef< CCmdComposite > GetCommand()

bool Create(wxWindow *parent, wxWindowID id=wxID_ANY, const wxString &caption=_("Fix Product Names"), const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxDefaultSize, long style=wxCAPTION|wxRESIZE_BORDER|wxSYSTEM_MENU|wxCLOSE_BOX|wxTAB_TRAVERSAL)

Creation.

void Init()

Initialises member variables.

void CreateControls()

Creates the controls and sizers.

CSeq_entry_Handle m_TopSeqEntry

static CRef< CCmdComposite > apply(CSeq_entry_Handle tse, bool before_punct=false, bool before_cap=false, bool before_num=false, bool rm_commas=false, bool keep_last=false)

wxBitmap GetBitmapResource(const wxString &name)

Retrieves bitmap resources.

static bool ShowToolTips()

Should we show tooltips?

~CFixProductNames()

Destructor.

wxIcon GetIconResource(const wxString &name)

Retrieves icon resources.

namespace ncbi::objects::

void FixAbbreviationsInElement(string &result, bool fix_end_of_sentence=true)

static const char * capitalized_names[]

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Set object to copy of another one.

size_t Replace(CTempStringEx search, CTempString replace, CRegexp::TCompile compile_flags=CRegexp::fCompile_default, CRegexp::TMatch match_flags=CRegexp::fMatch_default, size_t max_replace=0)

Replace occurrences of a substring within a string by pattern.

string GetResult(void)

Get result string.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static string & ReplaceInPlace(string &src, const string &search, const string &replace, SIZE_TYPE start_pos=0, SIZE_TYPE max_replace=0, SIZE_TYPE *num_replace=0)

Replace occurrences of a substring within a string.

bool IsSetName(void) const

protein name Check if a value has been assigned to Name data member.

bool IsSetProduct(void) const

Check if a value has been assigned to Product data member.

bool IsSetExt(void) const

generic fields for ncRNA, tmRNA, miscRNA Check if a value has been assigned to Ext data member.

bool IsGen(void) const

Check if variant Gen is selected.

const TGen & GetGen(void) const

Get the variant data.

const TName & GetName(void) const

Get the variant data.

const TProduct & GetProduct(void) const

Get the Product member data.

const TExt & GetExt(void) const

Get the Ext member data.

bool IsName(void) const

Check if variant Name is selected.

bool IsSetData(void) const

the specific data Check if a value has been assigned to Data data member.

bool IsProt(void) const

Check if variant Prot is selected.

const TData & GetData(void) const

Get the Data member data.

void SetData(TData &value)

Assign a value to Data data member.

const TProt & GetProt(void) const

Get the variant data.

const TRna & GetRna(void) const

Get the variant data.

bool IsRna(void) const

Check if variant Rna is selected.

where boath are integers</td > n< td ></td > n</tr > n< tr > n< td > tse</td > n< td > optional</td > n< td > String</td > n< td class=\"description\"> TSE option controls what blob is orig

const struct ncbi::grid::netcache::search::fields::SIZE size

Utility macros and typedefs for exploring NCBI objects from seqfeat.asn.

#define EDIT_EACH_NAME_ON_PROTREF(Itr, Var)

C++ wrappers for the Perl-compatible regular expression (PCRE) library.


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