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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/fingp__seqid_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/objutils/fingp_seqid.cpp Source File

& obj =

&

(object);

checksum.

(

.GetNumber());

checksum.

(

.GetApp_number());

User-defined methods of the data storage class.

Checksum and hash calculation classes.

CChecksum – Checksum calculator.

void Fingerprint(CChecksum &checksum, const CObject &obj, objects::CScope *scope) const

static void Register(TTypeInfo type_info, TFingerPFunc func)

static void s_Fingerprint_Giimport_id(CChecksum &checksum, const CObject &object, CScope *, const CObjFingerprint &)

static void s_Fingerprint_Dbtag(CChecksum &checksum, const CObject &object, CScope *scope, const CObjFingerprint &fingerP)

static void s_Fingerprint_Object_id(CChecksum &checksum, const CObject &object, CScope *, const CObjFingerprint &)

static void s_Fingerprint_Textseq_id(CChecksum &checksum, const CObject &object, CScope *, const CObjFingerprint &)

static void s_Fingerprint_Seq_id(CChecksum &checksum, const CObject &object, CScope *scope, const CObjFingerprint &fingerP)

static void s_Fingerprint_Patent_seq_id(CChecksum &checksum, const CObject &object, CScope *, const CObjFingerprint &)

static void s_Fingerprint_PDB_seq_id(CChecksum &checksum, const CObject &object, CScope *, const CObjFingerprint &)

void AddLine(const char *line, size_t len)

CConstRef< CSeq_id > GetSeqId(void) const

const CSeq_id & GetId(const CSeq_loc &loc, CScope *scope)

If all CSeq_ids embedded in CSeq_loc refer to the same CBioseq, returns the first CSeq_id found,...

@ eGetId_Seq_id_BestRank

use CSeq_id::BestRank() as the scoring function

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

E_Choice

Choice variants.

const TId & GetId(void) const

Get the Id member data.

const TCountry & GetCountry(void) const

Get the Country member data.

@ e_App_number

Patent Doc Appl Number.

@ e_not_set

No variant selected.

@ e_Number

Patent Document Number.

const TTag & GetTag(void) const

Get the Tag member data.

const TDb & GetDb(void) const

Get the Db member data.

E_Choice Which(void) const

Which variant is currently selected.

const TStr & GetStr(void) const

Get the variant data.

E_Choice

Choice variants.

TId GetId(void) const

Get the variant data.

@ e_not_set

No variant selected.

const TRelease & GetRelease(void) const

Get the Release member data.

TChain GetChain(void) const

Get the Chain member data.

const TEmbl & GetEmbl(void) const

Get the variant data.

const TPdb & GetPdb(void) const

Get the variant data.

TGibbsq GetGibbsq(void) const

Get the variant data.

TId GetId(void) const

Get the Id member data.

bool IsSetAccession(void) const

Check if a value has been assigned to Accession data member.

const TTpe & GetTpe(void) const

Get the variant data.

bool IsSetRelease(void) const

the release Check if a value has been assigned to Release data member.

const TGenbank & GetGenbank(void) const

Get the variant data.

const TTpd & GetTpd(void) const

Get the variant data.

const TTpg & GetTpg(void) const

Get the variant data.

E_Choice Which(void) const

Which variant is currently selected.

TGi GetGi(void) const

Get the variant data.

TVersion GetVersion(void) const

Get the Version member data.

bool CanGetVersion(void) const

Check if it is safe to call GetVersion method.

bool IsSetRelease(void) const

Check if a value has been assigned to Release data member.

const TRelease & GetRelease(void) const

Get the Release member data.

const TMol & GetMol(void) const

Get the Mol member data.

TSeqid GetSeqid(void) const

Get the Seqid member data.

E_Choice

Choice variants.

const TOther & GetOther(void) const

Get the variant data.

const TGiim & GetGiim(void) const

Get the variant data.

const TSwissprot & GetSwissprot(void) const

Get the variant data.

const TDdbj & GetDdbj(void) const

Get the variant data.

const TLocal & GetLocal(void) const

Get the variant data.

const TPir & GetPir(void) const

Get the variant data.

const TGpipe & GetGpipe(void) const

Get the variant data.

const TGeneral & GetGeneral(void) const

Get the variant data.

const TPatent & GetPatent(void) const

Get the variant data.

TGibbmt GetGibbmt(void) const

Get the variant data.

const TPrf & GetPrf(void) const

Get the variant data.

bool IsSetDb(void) const

dbase used in Check if a value has been assigned to Db data member.

const TCit & GetCit(void) const

Get the Cit member data.

const TDb & GetDb(void) const

Get the Db member data.

const TAccession & GetAccession(void) const

Get the Accession member data.

@ e_Gibbmt

Geninfo backbone moltype.

@ e_Giim

Geninfo import id.

@ e_Other

for historical reasons, 'other' = 'refseq'

@ e_Gpipe

Internal NCBI genome pipeline processing ID.

@ e_Tpe

Third Party Annot/Seq EMBL.

@ e_Tpd

Third Party Annot/Seq DDBJ.

@ e_Gibbsq

Geninfo backbone seqid.

@ e_General

for other databases

@ e_Gi

GenInfo Integrated Database.

@ e_not_set

No variant selected.

@ e_Tpg

Third Party Annot/Seq Genbank.

const string version

version string

const GenericPointer< typename T::ValueType > T2 value

#define CKSUM_ADD_INTEGER(cksum, value)

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