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NCBI C++ ToolKit: include/gui/widgets/seq_graphic/feature_panel.hpp Source File

(

objects::CMappedFeat& mapped_feat) { m_MappedFeat = mapped_feat; m_isMappedFeatSet =

; }

objects::CMappedFeat&

()

{

m_MappedFeat; }

m_isMappedFeatSet{

};

Update(

layout_only);

ConfigureTracks();

OnDataChanging();

UpdateGridStep(

step);

SetAssembly(

& assembly);

ShowConfigureTracksDlg(

& category);

ResetSearch();

LoadDefaultTracks();

SetTrackConfig(

TTrackSettingsSet& settings_set);

SetTrackConfig(

TTrackProxies& track_settings);

SkipGenuineCheck();

ShowTrack(

& track_key);

SaveTrackConfig();

OnTrackInitFinished(

* sender);

SetConfigKey(

& config_key);

SetDiscoverTracks(

=

);

x_Draw()

;

TKeyValuePairs& settings);

x_Empty()

;

x_GetTBRect(

& rect)

;

x_RenderTitleBar()

;

x_OnIconClicked(TIconID

);

eIcon_Color = eIcon_MaxTrackIconID + 1,

x_OnLayoutIconClicked();

x_OnColorIconClicked();

x_OnSizeIconClicked();

x_OnDecorationIconClicked();

x_OnLabelIconClicked();

x_ConfigureTracks(

makeContainersVisible =

);

TTrackProxies& proxies,

level);

x_InitTrackIcons();

x_RenderHairLineSelections()

;

x_RenderFeatureGrid()

;

x_CalcGridStep(

base_step,

min_step,

max_step)

;

x_GetShowDisplayLevel(

level)

;

x_SetShowDisplayLevel(

level,

show);

& track_name,

shown);

x_NeedSpecialGrid()

;

x_InitNATracks(

makeContainersVisible);

m_DiscoverTracks =

;

x_StartAssemblyJob();

vector<CRef<objects::CGC_Assembly> >&

()

{

m_Assemblies; }

GetCurrentAssembly()

;

m_search_match_case =

;

m_next_result = 0;

CAppJobNotification Notification send by CAppJobEventTranslator.

virtual void x_SaveSettings(CRegistryWriteView view) const

virtual void x_LoadSettings(const CRegistryReadView &view)

override these functions in derived classes

CRegularGridGen m_Gen

graphical grid.

CIRef< ISGDataSourceContext > m_DSContext

void SetImageInfo(TImageInfo *info)

Optional image info structure to return data to (cgi) caller.

void SetSelectedFeats(const TSelectedGlyphs &feats)

const TSelectedGlyphs * m_SelCDSFeatures

map< string, string > TTrackSettings

key-value pair for track settings

vector< TLevel > TDisplayLevels

bool m_CgiMode

special flag indicating if it is in cgi mode.

const TSelectedGlyphs * m_SelFeatures

SConstScopedObject m_InputObj

bool x_NeedSpecialGrid() const

need show special grid for the selected cds features.

vector< CRef< objects::CGC_Assembly > > m_Assemblies

void SetConfigKey(const string &config_key)

CRegularGridRenderer m_Grid

TAnnotMetaDataList m_NAData

vector< CMappedFeatOrObject > m_search_results

static CTrackTypeInfo m_TypeInfo

bool m_IconTexInitialized

flag indicating whether icon textures have been created.

void UpdateGridStep(int step)

TImageInfo * m_ImageInfo

Information about image that can be returned to client.

CRef< CExternalLayoutTrack > m_ExtLayoutTrack

void SetTrackConfig(const TTrackSettingsSet &settings_set)

@ eIcon_Decoration

feature decoration

void SetDSContext(ISGDataSourceContext *ds_ctx)

string m_ConfigKey

Base regitry key for panel setting and tracks default "GBPlugins.SeqGraphicFeatPanel" is for SV MSA s...

void SetSelectedCDSFeats(const TSelectedGlyphs &cds_feats)

void SkipGenuineCheck()

skip track existence verification.

void SetDiscoverTracks(bool value=true)

TDisplayLevels m_DisplayLevels

bool AssemblyLoaded() const

CSeqGraphicImageInfo TImageInfo

void SetDefaultAssembly(const string &defaultAssembly)

list< TTrackSettings > TTrackSettingsSet

TTrackProxies m_TrackSettings

initial track layout settings.

list< CWeakRef< CSeqGlyph > > TSelectedGlyphs

void SetServiceLocator(IServiceLocator *s)

virtual void x_Expand(bool)

Collapse or expand the track.

const vector< CRef< objects::CGC_Assembly > > & GetAssemblies() const

bool HasMappedFeat() const

const objects::CMappedFeat & GetMappedFeat() const

void SetMappedFeat(const objects::CMappedFeat &mapped_feat)

void SetRange(const TSeqRange &range)

void SetObject(const CObject *object)

objects::CMappedFeat m_MappedFeat

TSeqRange GetRange() const

const CObject * GetObject()

CConstRef< CObject > m_Object

CRenderingContext offers the basic context and utility methods for rendering layout objects in featur...

list< CRef< CSeqGlyph > > TObjects

CTrackContainer - a track container in the form of layout track.

void SetSkipGenuineCheck(bool flag)

CTempTrackProxy::TTrackProxies TTrackProxies

CTrackProxy data structure contains information about the position of a track in its parent scope,...

CTrackTypeInfo - holds description of a layout track type.

ISGDSManager is seqgraphic data source manage that serves as an data source context.

IServiceLocator - an abstract mechanism for locating services.

ITrackInitObserver: interface class work as an observer of a track that is responsible of intializing...

unsigned int TSeqPos

Type for sequence locations and lengths.

void SetStep(double step)

allow adjusting step externally.

void Reset(void)

Reset reference object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_GUIWIDGETS_SEQGRAPHIC_EXPORT

static void text(MDB_val *v)

const GenericPointer< typename T::ValueType > T2 value

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