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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/feat__importer_8cpp_source.html below:

NCBI C++ ToolKit: src/objtools/import/feat_importer.cpp Source File

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87

mErrorHandler(errorHandler)

126  mpReader

->SetProgressReportFrequency(5);

131  bool

terminateNow =

false

;

132  while

(!terminateNow) {

148

terminateNow =

true

;

virtual void SetIdResolver(CIdResolver *) override

virtual void ReadSeqAnnot(CStreamLineReader &, CSeq_annot &) override

unique_ptr< CFeatImportData > mpImportData

CImportMessageHandler & mErrorHandler

CFeatImporter_impl(unsigned int, CImportMessageHandler &)

unique_ptr< CFeatAnnotAssembler > mpAssembler

unique_ptr< CFeatLineReader > mpReader

unique_ptr< CIdResolver > mpIdResolver

void ReadSeqAnnot(CNcbiIstream &, CSeq_annot &)

static CFeatImporter * Get(const std::string &, unsigned int, CImportMessageHandler &)

void SetLineNumber(unsigned int lineNumber)

ErrorLevel Severity() const

unsigned int LineNumber() const

virtual void ReportError(const CImportError &)

Simple implementation of ILineReader for i(o)streams.

Uint8 GetLineNumber(void) const

Returns the current line number (counting from 1, not 0).

IO_PREFIX::istream CNcbiIstream

Portable alias for istream.

The blob sat and sat key Both must be positive integers</td > n< td > Non empty string The interpretation of the blob id depends on a processor Cassandra n processor expects the following format

Defines classes: CDirEntry, CFile, CDir, CSymLink, CMemoryFile, CFileUtil, CFileLock,...


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