Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/export__table_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/packages/pkg_sequence_edit/export_table.cpp Source File

wxWindowID

,

wxString& caption,

wxPoint& pos,

wxSize&

,

style )

(parent,

, caption, pos,

, style);

( wxWindow* parent, wxWindowID

,

wxString& caption,

wxPoint& pos,

wxSize&

,

style )

SetExtraStyle(wxWS_EX_BLOCK_EVENTS);

wxDialog::Create( parent,

, caption, pos,

, style );

GetSizer()->SetSizeHints(

);

wxBoxSizer* itemBoxSizer1 =

wxBoxSizer(wxVERTICAL);

itemDialog1->SetSizer(itemBoxSizer1);

itemBoxSizer1->Add(

, 0, wxALIGN_CENTER_HORIZONTAL|wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxArrayString source_quals;

itemBoxSizer1->Add(

, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

wxStaticBox* itemStaticBoxSizer2Static =

wxStaticBox(itemDialog1,

,

(

));

wxStaticBoxSizer* itemBoxSizer2 =

wxStaticBoxSizer(itemStaticBoxSizer2Static, wxVERTICAL);

itemBoxSizer1->Add(itemBoxSizer2, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

itemBoxSizer2->Add(

, 0, wxALIGN_LEFT|wxALL, 5);

itemBoxSizer2->Add(

, 0, wxALIGN_LEFT|wxALL, 5);

itemBoxSizer2->Add(

, 0, wxALIGN_LEFT|wxALL, 5);

itemBoxSizer2->Add(

, 0, wxALIGN_LEFT|wxALL, 5);

itemBoxSizer2->Add(

, 0, wxALIGN_LEFT|wxALL, 5);

itemBoxSizer2->Add(

, 0, wxALIGN_LEFT|wxALL, 5);

itemBoxSizer1->Add(

, 0, wxALIGN_CENTER_HORIZONTAL|wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxBoxSizer* itemBoxSizer11 =

wxBoxSizer(wxHORIZONTAL);

itemBoxSizer1->Add(itemBoxSizer11, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

wxButton* itemButton1 =

wxButton( itemDialog1, wxID_OK,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer11->Add(itemButton1, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxButton* itemButton2 =

wxButton( itemDialog1, wxID_CANCEL,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer11->Add(itemButton2, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

(!

(qual_name) && !objects::COrgMod::IsDiscouraged((*orgmod)->GetSubtype(),

)) {

}

(

&) {}

(

exception&) {}

(!

(qual_name) && !objects::CSubSource::IsDiscouraged((*subsource)->GetSubtype())) {

}

(

&) {}

(

exception&) {}

((*it)->IsSource()) {

(*(tse.GetCompleteSeq_entry()));

list< map<string, string> >

;

vector<pair<string, CIRef<IEditingAction> > > cds_gene_mrna_actions;

vector<string> cds_gene_mrna_fields;

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

cds_gene_mrna_fields.push_back(

);

(

field : cds_gene_mrna_fields)

(field ==

|| field ==

|| field ==

|| field ==

|| field ==

)

(field ==

|| field ==

|| field ==

)

( field ==

|| field ==

|| field ==

|| field ==

|| field ==

|| field ==

|| field ==

|| field ==

|| field ==

)

(field ==

|| field ==

)

(cds_gene_mrna_actions.back().second && !cds_gene_mrna_feat_action)

cds_gene_mrna_feat_action =

*

(cds_gene_mrna_actions.back().second.GetPointer());

(seen.

(fh) != seen.

())

(cds_gene_mrna_feat_action)

CSeq_loc& prot_loc = cds.

();

(

field_action : cds_gene_mrna_actions)

field = field_action.first;

is_feat_set(

);

vector<string>& values = feat_action->

();

= values.front();

(!

.empty())

(CSeq_loc_CI subloc(fh.

(), objects::CSeq_loc_CI::eEmpty_Skip); subloc; ++subloc)

[

] = seqid;

vector<pair<string, CIRef<IEditingAction> > > actions;

vector<string> fields;

fields.push_back(

);

fields.push_back(

);

fields.push_back(

);

fields.push_back(

);

fields.push_back(

);

fields.push_back(

);

fields.push_back(

);

fields.push_back(

);

fields.push_back(

);

fields.push_back(

);

fields.push_back(

);

fields.push_back(

);

(

field : fields)

( field ==

|| field ==

|| field ==

|| field ==

|| field ==

|| field ==

)

(field ==

)

(field ==

|| field ==

)

(field ==

)

(actions.back().second && !rna_feat_action)

rna_feat_action =

*

(actions.back().second.GetPointer());

(

field_action : actions)

field = field_action.first;

is_feat_set(

);

vector<string>& values = feat_action->

();

= values.front();

(!

.empty())

(CSeq_loc_CI subloc(

.GetLocation(), objects::CSeq_loc_CI::eEmpty_Skip); subloc; ++subloc)

[

] = seqid;

table_it =

.begin();

vector<string> fields;

wxArrayInt selections;

(

j = 0; j < num; j++)

= selections[j];

fields.push_back(*s);

fields.push_back(sel);

vector<pair<string, CIRef<IEditingAction> > > actions;

(

&field : fields)

(

field_action : actions)

field = field_action.first;

vector<string>& values = action->

();

= values.front();

(!

.empty())

(

field_action : actions)

field = field_action.first;

vector<string>& values = action->

();

= values.front();

(!

.empty())

(table_it !=

.end() && (*table_it)[

] == seqid)

table_it->insert(

.begin(),

.end());

(!found && !

.empty())

[

] = seqid;

table_it =

.insert(table_it,

);

CSeq_table::TColumns::iterator col = values_table->

().begin();

(col != values_table->

().end())

do_remove =

;

((*col)->IsSetData())

((*col)->GetData().IsString())

empty_col =

;

(

= 0;

< (*col)->GetData().GetString().

() && empty_col;

++)

empty_col = empty_col && (*col)->GetData().GetString()[

].empty();

col = values_table->

().erase(col);

vector<size_t> erase_rows;

(

= 0;

< num_rows;

++)

empty_row =

;

(CSeq_table::TColumns::iterator col = values_table->

().begin(); col != values_table->

().end(); ++col)

((*col)->IsSetData() && (*col)->GetData().IsString() &&

< (*col)->GetData().GetString().size())

empty_row = empty_row && (*col)->GetData().GetString()[

].empty();

erase_rows.push_back(

);

(

= erase_rows.size()-1;

>= 0;

--)

(CSeq_table::TColumns::iterator col = values_table->

().begin(); col != values_table->

().end(); ++col)

((*col)->IsSetData() && (*col)->GetData().IsString() && erase_rows[

] < (*col)->GetData().GetString().size())

(*col)->SetData().SetString().erase((*col)->SetData().SetString().begin()+erase_rows[

]);

((*col)->IsSetData() && (*col)->GetData().IsId() && erase_rows[

] < (*col)->GetData().GetId().size())

(*col)->SetData().SetId().erase((*col)->SetData().SetId().begin()+erase_rows[

]);

field(

);

(!

.empty())

[

] = seqid;

((*qual)->IsSetQual() && (*qual)->IsSetVal() && !(*qual)->GetQual().empty() && !(*qual)->GetVal().empty())

field = feat_name +

+ (*qual)->GetQual();

= (*qual)->GetVal();

(CSeq_loc_CI subloc(feat->GetLocation(), objects::CSeq_loc_CI::eEmpty_Skip); subloc; ++subloc)

[

] = seqid;

vector<pair<string, CIRef<IEditingAction> > > actions;

(

&field : pubs)

(

field_action : actions)

field = field_action.first;

vector<string>& values = action->

();

= values.front();

(!

.empty())

[

] = seqid;

vector<pair<string, CIRef<IEditingAction> > > actions;

(

&field : dbs)

(desc_ci->GetUser().IsSetType() && desc_ci->GetUser().GetType().IsStr()

(

field_action : actions)

field = field_action.first;

vector<string>& values = action->

();

= values.front();

(!

.empty())

[

] = seqid;

wxMessageBox(

(

),

(

),

wxOK | wxICON_ERROR, parent);

wxFileDialog table_save_file(parent,

(

), save_file_dir, save_file_name,

(

),

wxFD_SAVE|wxFD_OVERWRITE_PROMPT);

(table_save_file.ShowModal() == wxID_OK)

wxString path = table_save_file.GetPath();

wxString name = table_save_file.GetFilename();

wxMessageBox(

(

),

(

),

wxOK | wxICON_ERROR, parent);

wxMessageBox(

(

)+name,

(

),

wxOK | wxICON_ERROR, parent);

exporter.

(

(

));

exporter.

(col);

seqid =

[

];

.erase(

);

exporter.

(seqid);

save_file_dir = table_save_file.GetDirectory();

save_file_name = table_save_file.GetFilename();

wxAutomationObject ExcelObject;

(ExcelObject.GetInstance(

(

)))

ExcelObject.CallMethod(

, FileName);

ExcelObject.PutProperty(

,

);

User-defined methods of the data storage class.

static string GetSubtypeName(const CSubSource &qual)

const string & GetTaxname(void) const

bool IsSetTaxname(void) const

void Field(const string &value)

static vector< string > GetFieldNames()

void CreateControls()

Creates the controls and sizers.

void SaveTableFile(wxWindow *parent, wxString &save_file_dir, wxString &save_file_name, const list< map< string, string > > &table, const set< string > &columns)

set< string > m_source_choices

void Init()

Initialises member variables.

bool Create(wxWindow *parent, wxWindowID id=ID_EXPORT_TABLE_DLG, const wxString &caption=_("Export Table"), const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxDefaultSize, long style=wxCAPTION|wxRESIZE_BORDER|wxSYSTEM_MENU|wxCLOSE_BOX|wxTAB_TRAVERSAL)

Creation.

wxListBox * m_SourceChoice

void AddRnaToTable(list< map< string, string > > &table, set< string > &columns)

static bool ShowToolTips()

Should we show tooltips?

wxRadioButton * m_CdsGeneProtRB

void GetDesc(const CSeq_entry &se)

void AddSourceToTable(list< map< string, string > > &table, set< string > &columns)

void FindBioSource(objects::CSeq_entry_Handle tse)

wxRadioButton * m_FeatureRB

objects::CSeq_entry_Handle m_TopSeqEntry

CExportTableDlg()

Constructors.

void AddFeaturesToTable(list< map< string, string > > &table, set< string > &columns)

void AddDeflinesToTable(list< map< string, string > > &table, set< string > &columns)

void RunExcel(wxString FileName)

wxCheckBox * m_SourceCheck

void AddPubsToTable(list< map< string, string > > &table, set< string > &columns)

void AddBioSource(const CBioSource &biosource)

wxIcon GetIconResource(const wxString &name)

Retrieves icon resources.

void SaveTable(const wxString &workDir=wxEmptyString)

wxRadioButton * m_DbLinkRB

wxBitmap GetBitmapResource(const wxString &name)

Retrieves bitmap resources.

wxCheckBox * m_ExcelCheck

~CExportTableDlg()

Destructor.

wxRadioButton * m_DeflineRB

void AddDblinkToTable(list< map< string, string > > &table, set< string > &columns)

static void RemoveEmptyColsAndRows(CRef< CSeq_table > values_table)

void AddCdsGeneMrnaTable(list< map< string, string > > &table, set< string > &columns)

static vector< string > GetFieldNames(bool extended=false)

static CTempString SubtypeValueToName(ESubtype eSubtype)

Turns a ESubtype into its string value which is NOT necessarily related to the identifier of the enum...

void SetFeat(CSeq_feat_Handle fh)

void SetDesc(const CSeqdesc *desc)

void SetDesc(const CSeqdesc *desc)

CSeq_feat_Handle x_FindGeneForFeature(const CSeq_loc &loc, CScope &scope, CSeqFeatData::ESubtype subtype)

virtual void SetFeat(CSeq_feat_Handle fh)

CSeqFeatData::ESubtype GetActionFeatSubtype()

const vector< string > & GetValues(void)

iterator_bool insert(const value_type &val)

const_iterator begin() const

const_iterator find(const key_type &key) const

const_iterator end() const

CIRef< IEditingAction > CreateAction(CSeq_entry_Handle seh, const string &field, CFieldNamePanel::EFieldType field_type, int subtype, const string &ncRNA_class=kEmptyStr, CConstRef< objects::CSeq_submit > submit=CConstRef< objects::CSeq_submit >(NULL))

std::ofstream out("events_result.xml")

main entry point for tests

const char * kSubSourceNote

static const column_t columns[]

void GetLabel(string *label, ELabelType type=eDefault, TLabelFlags flags=fLabel_Default) const

Append a label for this Seq-id to the supplied string.

@ eContent

Untagged human-readable accession or the like.

const CSeq_id & GetId(const CSeq_loc &loc, CScope *scope)

If all CSeq_ids embedded in CSeq_loc refer to the same CBioseq, returns the first CSeq_id found,...

@ eGetId_Best

return the "best" gi (uses FindBestScore(), with CSeq_id::CalculateScore() as the score function

CBioseq_Handle GetBioseqHandle(const CSeq_id &id)

Get bioseq handle by seq-id.

const CSeqFeatData & GetData(void) const

virtual const CSeq_loc & GetProduct(void) const

bool IsSetProduct(void) const

virtual const CSeq_loc & GetLocation(void) const

CSeqFeatData::ESubtype GetFeatSubtype(void) const

const CSeq_feat_Handle & GetSeq_feat_Handle(void) const

Get original feature handle.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

IO_PREFIX::ofstream CNcbiOfstream

Portable alias for ofstream.

static bool IsBlank(const CTempString str, SIZE_TYPE pos=0)

Check if a string is blank (has no text).

static bool EqualNocase(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2)

Case-insensitive equality of a substring with another string.

@ eSubtype_specimen_voucher

@ eSubtype_culture_collection

void SetNum_rows(TNum_rows value)

Assign a value to Num_rows data member.

TNum_rows GetNum_rows(void) const

Get the Num_rows member data.

TColumns & SetColumns(void)

Assign a value to Columns data member.

const TBiosrc & GetBiosrc(void) const

Get the variant data.

const TSet & GetSet(void) const

Get the variant data.

bool IsSet(void) const

Check if variant Set is selected.

const TTitle & GetTitle(void) const

Get the variant data.

@ e_User

user defined object

@ e_Pub

a reference to the publication

@ e_Title

a title for this sequence

@ e_Source

source of materials, includes Org-ref

<!DOCTYPE HTML >< html > n< header > n< title > PubSeq Gateway Help Page</title > n< style > n table

const struct ncbi::grid::netcache::search::fields::SIZE size

const GenericPointer< typename T::ValueType > T2 value

Utility macros and typedefs for exploring NCBI objects from seqfeat.asn.

#define FOR_EACH_ORGMOD_ON_BIOSOURCE(Itr, Var)

FOR_EACH_ORGMOD_ON_BIOSOURCE EDIT_EACH_ORGMOD_ON_BIOSOURCE.

#define FOR_EACH_GBQUAL_ON_SEQFEAT(Itr, Var)

FOR_EACH_GBQUAL_ON_SEQFEAT EDIT_EACH_GBQUAL_ON_SEQFEAT.

#define FOR_EACH_SUBSOURCE_ON_BIOSOURCE(Itr, Var)

FOR_EACH_SUBSOURCE_ON_BIOSOURCE EDIT_EACH_SUBSOURCE_ON_BIOSOURCE.

Utility macros and typedefs for exploring NCBI objects from seqset.asn.

#define FOR_EACH_SEQENTRY_ON_SEQSET(Itr, Var)

FOR_EACH_SEQENTRY_ON_SEQSET EDIT_EACH_SEQENTRY_ON_SEQSET.

#define FOR_EACH_SEQDESC_ON_SEQENTRY(Itr, Var)

FOR_EACH_SEQDESC_ON_SEQENTRY EDIT_EACH_SEQDESC_ON_SEQENTRY.

#define row(bind, expected)

wxString ToWxString(const string &s)

string ToStdString(const wxString &s)

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4