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NCBI C++ ToolKit: src/objtools/flatfile/entry.h Source File

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16  const

vector<string>& textLines) :

18  mTextLines

(textLines.begin(), textLines.end()),

36  for

(

auto

line : subPtr->mTextLines) {

37

ostr <<

">> "

<< line << endl;

62  const char

* baseData) :

78  if

(secPtr->mType ==

type

) {

EntryPtr LoadEntryGenbank(ParserPtr pp, size_t offset, size_t len)

DataBlk * LoadEntry(ParserPtr pp, size_t offset, size_t len)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static string Join(const TContainer &arr, const CTempString &delim)

Join strings using the specified delimiter.

list< SectionPtr > mSections

bool xInitSeqInst(const unsigned char *pConvert)

bool xInitNidSeqId(objects::CBioseq &, int type, int dataOffset, Parser::ESource)

CRef< objects::CSeq_entry > mSeqEntry

SectionPtr GetFirstSectionOfType(int type)

Entry(ParserPtr pp, const char *baseData)

void AppendSection(SectionPtr secPtr)

Section(int type_, const vector< string > &textLines)

void DumpText(ostream &ostr) const

vector< Section * > mSubSections

vector< string > mTextLines

void xBuildFeatureBlocks()

void xBuildSubBlock(int subtype, string_view subKw)


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