Unit test module for deltablast. More...
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Unit test module for deltablast.
Definition in file delta_unit_test.cpp.
◆ STATIC_ARRAY_SIZE ◆ BOOST_AUTO_TEST_CASE() [1/7] BOOST_AUTO_TEST_CASE ( TestMultipleQueries ) ◆ BOOST_AUTO_TEST_CASE() [2/7] BOOST_AUTO_TEST_CASE ( TestNullDatabase ) ◆ BOOST_AUTO_TEST_CASE() [3/7] BOOST_AUTO_TEST_CASE ( TestNullDomainDatabase ) ◆ BOOST_AUTO_TEST_CASE() [4/7] BOOST_AUTO_TEST_CASE ( TestNullOptions ) ◆ BOOST_AUTO_TEST_CASE() [5/7] ◆ BOOST_AUTO_TEST_CASE() [6/7] BOOST_AUTO_TEST_CASE ( TestSingleQuery_CBS )Definition at line 215 of file delta_unit_test.cpp.
References copy(), ctll::empty(), ctll::front(), Get(), CDeltaBlast::GetDomainResults(), CBioseq::GetFirstId(), CSeq_id_Base::GetGi(), CDeltaBlast::GetPssm(), CPssmWithParameters::GetQuery(), CSeq_entry_Base::GetSeq(), GI_CONST, CPssmWithParameters::HasQuery(), CBioseq_Base::IsSetInst(), m_Scope, query, results, CDeltaBlast::Run(), SeqAlignSetConvert(), CBlastRPSOptionsHandle::SetCompositionBasedStats(), CBlastOptionsHandle::SetEvalueThreshold(), CBlastOptionsHandle::SetFilterString(), and STATIC_ARRAY_SIZE.
◆ BOOST_AUTO_TEST_CASE() [7/7] BOOST_AUTO_TEST_CASE ( TestSingleQuery_NoCBS )Definition at line 471 of file delta_unit_test.cpp.
References copy(), CSearchDatabase::eBlastDbIsProtein, ctll::empty(), eNoCompositionBasedStats, ctll::front(), Get(), CDeltaBlast::GetDomainResults(), CBioseq::GetFirstId(), CSeq_id_Base::GetGi(), CDeltaBlast::GetPssm(), CPssmWithParameters::GetQuery(), CSeq_entry_Base::GetSeq(), GI_CONST, CPssmWithParameters::HasQuery(), CBioseq_Base::IsSetInst(), m_Scope, query, results, CDeltaBlast::Run(), SeqAlignSetConvert(), CBlastRPSOptionsHandle::SetCompositionBasedStats(), CBlastOptionsHandle::SetEvalueThreshold(), and STATIC_ARRAY_SIZE.
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