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NCBI C++ ToolKit: src/algo/structure/cd_utils/cuStdAnnotTypes.cpp Source File

ID(

);

list<string> categories,

;

dummyRegistry.

(*iniIn, readFlags);

(list<string>, cit, categories) {

typeNamesPair.first = *cit;

(*eit == ID || *eit ==

)

;

values.push_back(

);

(values.begin(), values.end());

(; (satdCit != satdEnd) && !

; ++satdCit) {

(

(satdCit->second.first, typeStr.c_str(), caseSensitiveEqual)) {

typeStr = cit->second.first;

(typeStr.length() == 0)

=

;

(; (satdCit != satdEnd); ++satdCit) {

(

(satdCit->second.first, typeStr.c_str(), caseSensitiveEqual)) {

typeNames = cit->second.second;

(typeNames.size() == 0)

=

;

typeNames = cit->second.second;

(typeNames.size() == 0)

=

;

typeNamesPair.first = cit->second.first;

typeNamesPair.second = cit->second.second;

(TTypeNames::const_iterator nCit =

.begin(); nCit !=

.end(); ++nCit) {

(

(nCit->c_str(), descr.c_str(), caseSensitiveEqual)) {

(; (satdCit != satdEnd) && !

; ++satdCit) {

(TTypeNames::const_iterator nCit =

.begin(); nCit !=

.end(); ++nCit, ++index) {

(

(nCit->c_str(), descr.c_str(), caseSensitiveEqual)) {

= satdCit->first;

static bool IsValidTypeStr(const string &typeStr, bool useCase=true)

static int GetTypeAsInt(const string &typeStr, bool useCase=true)

static bool GetTypeAsString(int type, string &typeStr)

static bool GetTypeNamesPair(int type, TTypeNamesPair &typeNamesPair)

static const int m_invalidType

static bool IsPredefinedDescr(const string &descr, int &type, int &typeIndex, bool useCase=true)

static bool LoadTypes(const string &iniFile)

static bool IsValidType(int type)

static bool IsPredefinedDescrForType(int type, const string &descr, bool useCase=true)

static TStandardTypesData m_stdAnnotTypeData

static bool GetTypeNames(int type, TTypeNames &typeNames)

container_type::const_iterator const_iterator

const_iterator begin() const

const_iterator end() const

const_iterator find(const key_type &key) const

Include a standard set of the NCBI C++ Toolkit most basic headers.

vector< string > TTypeNames

pair< string, TTypeNames > TTypeNamesPair

static const struct name_t names[]

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define ERR_POST(message)

Error posting with file, line number information but without error codes.

void Trace(CExceptionArgs_Base &args)

virtual void EnumerateSections(list< string > *sections, TFlags flags=fAllLayers) const

Enumerate section names.

virtual int GetInt(const string &section, const string &name, int default_value, TFlags flags=0, EErrAction err_action=eThrow) const

Get integer value of specified parameter name.

virtual void EnumerateEntries(const string &section, list< string > *entries, TFlags flags=fAllLayers) const

Enumerate parameter names for a specified section.

IRWRegistry * Read(CNcbiIstream &is, TFlags flags=0, const string &path=kEmptyStr)

Read and parse the stream "is", and merge its content with current Registry entries.

virtual string GetString(const string &section, const string &name, const string &default_value, TFlags flags=0) const

Get the parameter string value.

@ fInternalSpaces

Allow internal whitespace in names.

@ eReturn

Return default value.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

IO_PREFIX::ifstream CNcbiIfstream

Portable alias for ifstream.

static void TruncateSpacesInPlace(string &str, ETrunc where=eTrunc_Both)

Truncate whitespace in a string (in-place)

ECase

Which type of string comparison.

static bool Equal(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2, ECase use_case=eCase)

Test for equality of a substring with another string.

@ eNocase

Case insensitive compare.

@ eCase

Case sensitive compare.

constexpr auto sort(_Init &&init)

const GenericPointer< typename T::ValueType > T2 value

Process information in the NCBI Registry, including working with configuration files.

std::istream & in(std::istream &in_, double &x_)

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