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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/cuGlobalDefs_8hpp.html below:

NCBI C++ ToolKit: include/algo/structure/cd_utils/cuGlobalDefs.hpp File Reference

#include <corelib/ncbiargs.hpp>
#include <objects/seqalign/Seq_align.hpp>

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Enumerations enum   CoordMapDir { CHILD_TO_MASTER = 0 , MASTER_TO_CHILD }   enum   AlignmentScoreType { E_VALUE = 0x01 , RAW_SCORE = 0x02 , BIT_SCORE = 0x04 , N_IDENTICAL = 0x08 }   Functions   USING_SCOPE (objects)   Variables const double  E_VAL_NOT_FOUND = 1.0e6   const int  SCORE_NOT_FOUND = 0   const int  INVALID_POSITION = -1   Enumeration Type Documentation ◆ AlignmentScoreType enum AlignmentScoreType Enumerator E_VALUE  RAW_SCORE  BIT_SCORE  N_IDENTICAL 

Definition at line 52 of file cuGlobalDefs.hpp.

◆ CoordMapDir enum CoordMapDir Enumerator CHILD_TO_MASTER  MASTER_TO_CHILD 

Definition at line 47 of file cuGlobalDefs.hpp.

Function Documentation ◆ USING_SCOPE() USING_SCOPE ( objects  ) Variable Documentation ◆ E_VAL_NOT_FOUND const double E_VAL_NOT_FOUND = 1.0e6

Definition at line 59 of file cuGlobalDefs.hpp.

◆ INVALID_POSITION const int INVALID_POSITION = -1

Definition at line 61 of file cuGlobalDefs.hpp.

Referenced by CCdCore::AlignAnnotsValid(), CCdCore::GetLowerBound(), CCdCore::GetUpperBound(), IsPositionAligned(), MapPosition(), and CCdCore::MapPositionToOtherRow().

◆ SCORE_NOT_FOUND const int SCORE_NOT_FOUND = 0

Definition at line 60 of file cuGlobalDefs.hpp.

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