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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/cuDbPriority_8cpp_source.html below:

NCBI C++ ToolKit: src/algo/structure/cd_utils/cuDbPriority.cpp Source File

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117

m_[

"refseq: automated/no transcript"

] =

eDPRefSeqYP

;

119

m_[

"refseq: automated/shotgun [obsolete]"

] =

eDPRefSeqZP

;

206  if

(accession.length() > 0) {

207  string

refseqPrefix = accession.substr(0,2);

278  string

name =

"unknown"

;

296  typedef

pair<TSourceNameMap::iterator, TSourceNameMap::iterator>

TPair

;

300  names

.push_back(it->second);

302  return static_cast<unsigned int>

(

names

.size());

334  return

(prio1 == prio2) ? 0 : ((prio1 < prio2) ? 1 : -1);

TSourcePriorityMap::iterator TSourcePriorityIt

static TDbPriority GetPriority(string dbSource)

static CSafeStatic< TSourceNameMap > m_sourceNameMap

static EDbSource SeqIdTypeToSourceCode(unsigned int seqIdType, string accession=kEmptyStr)

static unsigned int GetSourceNames(EDbSource priority, vector< string > &names)

TSourceNameMap::value_type TSourceNameVT

static string SeqIdTypeToSource(unsigned int seqIdType, string accession=kEmptyStr)

static EDbSource GetSourceCode(string dbSource)

static bool IsKnownDbSource(string dbSource)

static string GetSourceName(EDbSource priority)

static CSafeStatic< TNameSourceMap > m_nameSourceMap

static TDbPriority SeqIdTypeToPriority(unsigned int seqIdType, string accession=kEmptyStr)

static int CompareSources(const string &source1, const string &source2)

static CSafeStatic< TSourcePriorityMap > m_sourcePriorityMap

container_type::iterator iterator

container_type::iterator iterator

The NCBI C++ standard methods for dealing with std::string.

SStaticPair< const char *, const char * > TPair

static const struct name_t names[]

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

static int CompareNocase(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2)

Case-insensitive compare of a substring with another string.

Template structure SStaticPair is simlified replacement of STL pair<> Main reason of introducing this...


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